RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 GABARAPL1Q9H0R8 117 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 WNT5BQ9H1J7 359 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 FN3KQ9H479 309 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 CMC2Q9NRP2 79 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 ASH2LQ9UBL3 628 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 ATPIF1Q9UII2 106 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 F8P00451 2351 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
CHMP3-205ENST00000409810 ITPR3Q14573 2671 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 C5orf49A4QMS7 147 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 DCTN6O00399 190 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 MPZL1O95297 269 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 SCG5P05408 212 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 LCKP06239 509 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ERCC1P07992 297 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-205ENST00000409810 FAM157BP0CG42 384 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 CCL2P13500 99 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 HTR5AP47898 357 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 EVX1P49640 407 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 PPOXP50336 477 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ESRRGP62508 458 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ADAM8P78325 824 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 TEKQ02763 1124 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 CRMP1Q14194 572 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 GINS1Q14691 196 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 RAB35Q15286 201 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF774Q6NX45 483 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 FAHD1Q6P587 224 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-205ENST00000409810 AMIGO2Q86SJ2 522 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 TGIF2LYQ8IUE0 185 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 IQCF1Q8N6M8 205 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 CPEB3Q8NE35 698 aaKnown RBP9.41□□□□□ -0.9
CHMP3-205ENST00000409810 OR2AJ1Q8NGZ0 328 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 IPCEF1Q8WWN9 437 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-205ENST00000409810 POM121L2Q96KW2 1035 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 DDOQ99489 341 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
CHMP3-205ENST00000409810 HDHD2Q9H0R4 259 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 ELOVL3Q9HB03 270 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 SLC25A19Q9HC21 320 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 DYNLRB1Q9NP97 96 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 KRT84Q9NSB2 600 aa9.41□□□□□ -0.9
CHMP3-205ENST00000409810 OR6C6A6NF89 314 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 FAM171A2A8MVW0 826 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 GPRIN2O60269 458 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 ABHD16AO95870 558 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 FMO3P31513 532 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 PYCR1P32322 319 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 DAPP51397 102 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 NUDT6P53370 316 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 CRISP1P54107 249 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 UCP2P55851 309 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 MEP1BQ16820 701 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 ZNF362Q5T0B9 420 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-205ENST00000409810 VASH1Q7L8A9 365 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-205ENST00000409810 PAQR4Q8N4S7 273 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-205ENST00000409810 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 OR9Q1Q8NGQ5 310 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 OR1F12Q8NHA8 337 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 OTULINQ96BN8 352 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 COG8Q96MW5 612 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 DCLRE1CQ96SD1 692 aaKnown RBP9.4□□□□□ -0.9
CHMP3-205ENST00000409810 COQ7Q99807 217 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
CHMP3-205ENST00000409810 RAB1BQ9H0U4 201 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 SEMA6AQ9H2E6 1030 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 OR51B6Q9H340 312 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 GPR160Q9UJ42 338 aa9.4□□□□□ -0.9
CHMP3-205ENST00000409810 LOC100509620A0A075B734 347 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 A0A1W2PPW3 197 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 PRR23D1E9PI22 279 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 H3BSA7 217 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 J3QW42 95 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 M0R233 179 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 RER1O15258 196 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SURF4O15260 269 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SYNGR3O43761 229 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 GPANK1O95872 356 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 TFP02787 698 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 PRR23D2P0DMB1 279 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 SPI1P17947 270 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 TUBG1P23258 451 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 IGFBP5P24593 272 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 GCH1P30793 250 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 KLF3P57682 345 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 CDK5Q00535 292 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 GABPB1Q06547 395 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 MOGQ16653 247 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 MST1LQ2TV78 715 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 CCDC92Q53HC0 331 aaPredicted RBP9.39□□□□□ -0.91
CHMP3-205ENST00000409810 ELFN2Q5R3F8 820 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 KDM4DQ6B0I6 523 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 ACSM5Q6NUN0 579 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
CHMP3-205ENST00000409810 OR1J1Q8NGS3 322 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms