RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 A0A1W2PPK0 400 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 A0A1W2PPL8 197 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 ANKRD61A6NGH8 418 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 NOTOA8MTQ0 251 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 K7EM74 188 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 GPR171O14626 319 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 WNT11O96014 354 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 THBS2P35442 1172 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 CSNK1A1P48729 337 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 STARP49675 285 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 SUCLG1P53597 346 aaKnown RBP12.49□□□□□ -0.41
LIMS2-206ENST00000409754 OR10A3P58181 314 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 HYAL4Q2M3T9 481 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 WDR38Q5JTN6 314 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 LRFN4Q6PJG9 635 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 LINC00346Q8IVM7 164 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 MINDY2Q8NBR6 621 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 THRSPQ92748 146 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 PNPLA2Q96AD5 504 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 INTS12Q96CB8 462 aaKnown RBP12.49□□□□□ -0.41
LIMS2-206ENST00000409754 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
LIMS2-206ENST00000409754 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
LIMS2-206ENST00000409754 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 KLRC4-KLRK1H3BQV0 150 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PDCD5O14737 125 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CXCL13O43927 109 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 HPGDSO60760 199 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SLC19A2O60779 497 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SRSF10O75494 262 aaKnown RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 GLSO94925 669 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CD46P15529 392 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SRMP19623 302 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CLDN15P56746 228 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 OXA1LQ15070 435 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CEP78Q5JTW2 689 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 ABLIM2Q6H8Q1 611 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 OR7E24Q6IFN5 339 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 METAP1DQ6UB28 335 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SPATC1Q76KD6 591 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CATSPERDQ86XM0 798 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 ZIC4Q8N9L1 334 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 HAS2Q92819 552 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 DAPK2Q9UIK4 370 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 R4GMQ9 66 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 FABP12A6NFH5 140 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 A6NL46 340 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 TMEM127O75204 238 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PNPP00491 289 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 RAF1P04049 648 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PDGFAP04085 211 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 OCM2P0CE71 109 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PTBP1P26599 531 aaKnown RBP eCLIP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 APEX1P27695 318 aaKnown RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 MEOX1P50221 254 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 PLGLB1Q02325 96 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF79Q15937 498 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 STEAP3Q658P3 488 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 XKRXQ6PP77 449 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 FAM131AQ6UXB0 335 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 FOXL2NBQ6ZUU3 175 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 GALNTL5Q7Z4T8 443 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 OR6N1Q8NGY5 312 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 CPNE4Q96A23 557 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SOSTQ9BQB4 213 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 C1orf198Q9H425 327 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-206ENST00000409754 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 POLE4Q9NR33 117 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 RCE1Q9Y256 329 aa12.48□□□□□ -0.41
LIMS2-206ENST00000409754 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 KIAA1549Q9HCM3 1950 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 CEACAM4O75871 244 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 FAM87AP0C7U9 286 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 EPXP11678 715 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 DCTDP32321 178 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 RFC3P40938 356 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 EVX1P49640 407 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-206ENST00000409754 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 SLC25A35Q3KQZ1 300 aa12.47□□□□□ -0.41
LIMS2-206ENST00000409754 CORO6Q6QEF8 472 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms