RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 VAMP5O95183 116 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 CD2P06729 351 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 HIST3H3Q16695 136 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 JMJD6Q6NYC1 403 aaPredicted RBP18.4■□□□□ 0.54
USP39-203ENST00000409470 ZNF227Q86WZ6 799 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 ASB5Q8WWX0 329 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 ZC3HAV1LQ96H79 300 aaKnown RBP18.4■□□□□ 0.54
USP39-203ENST00000409470 RNF121Q9H920 327 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 G6PC2Q9NQR9 355 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 MEIOCA2RUB1 952 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 TRAPPC6AO75865 159 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 ADRB1P08588 477 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 MMP15P51511 669 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 B3GALT5-AS1P59052 145 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 BCL2L15Q5TBC7 163 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 RSBN1Q5VWQ0 802 aaPredicted RBP18.39■□□□□ 0.53
USP39-203ENST00000409470 CREB3L2Q70SY1 520 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 KRT74Q7RTS7 529 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 CHAC2Q8WUX2 184 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 SLC25A38Q96DW6 304 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 NPAP1Q9NZP6 1156 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 LRFN1Q9P244 771 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 CKLFQ9UBR5 152 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 GDF2Q9UK05 429 aaPredicted RBP18.39■□□□□ 0.53
USP39-203ENST00000409470 HHLA2Q9UM44 414 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 LRRC3CA6NJW4 275 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.39■□□□□ 0.53
USP39-203ENST00000409470 STMND1H3BQB6 276 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 RFPL3SP0C7P2 107 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 NR2C1P13056 603 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 ABHD17BQ5VST6 288 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 HACD4Q5VWC8 232 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 ZNF704Q6ZNC4 412 aaPredicted RBP18.39■□□□□ 0.53
USP39-203ENST00000409470 GLCCI1Q86VQ1 547 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 SERPINA12Q8IW75 414 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 OR13C3Q8NGS6 347 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 OR6N1Q8NGY5 312 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 SYNPRQ8TBG9 265 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 KCNE4Q8WWG9 221 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 DEPPQ9NTK1 212 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 NLKQ9UBE8 527 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 ETV7Q9Y603 341 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 LHFPL6Q9Y693 200 aa18.39■□□□□ 0.53
USP39-203ENST00000409470 LOC107986453A0A1B0GWG9 222 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 H0YC42 278 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 CD3GP09693 182 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 ACHEP22303 614 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 CSNK1A1P48729 337 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 DGCR2P98153 550 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 SPINK14Q6IE38 97 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 CFAP77Q6ZQR2 320 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 DUSP18Q8NEJ0 188 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 OR9K2Q8NGE7 335 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 SLC39A7Q92504 469 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 S100A16Q96FQ6 103 aaKnown RBP18.38■□□□□ 0.53
USP39-203ENST00000409470 SFXN2Q96NB2 322 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 GLTPQ9NZD2 209 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 RABL2AQ9UBK7 228 aaPredicted RBP18.38■□□□□ 0.53
USP39-203ENST00000409470 STEAP1Q9UHE8 339 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 RABL2BQ9UNT1 228 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 DOCK10Q96BY6 2186 aa18.38■□□□□ 0.53
USP39-203ENST00000409470 CNR1P21554 472 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ITGA3P26006 1051 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 CASRP41180 1078 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 MMP16P51512 607 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ART1P52961 327 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 CLDN20P56880 219 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 GPR176Q14439 515 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 POU4F3Q15319 338 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 TMEM244Q5VVB8 128 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 RAB40AQ8WXH6 277 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 YIPF5Q969M3 257 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ZNF385AQ96PM9 386 aaKnown RBP18.37■□□□□ 0.53
USP39-203ENST00000409470 SRXN1Q9BYN0 137 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ABCG5Q9H222 651 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 WDPCPO95876 746 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ISG15P05161 165 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 UBCP0CG48 685 aaKnown RBP18.37■□□□□ 0.53
USP39-203ENST00000409470 ENPP1P22413 925 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 GDF1P27539 372 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 CD96P40200 585 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 GUCA1AP43080 201 aaPredicted RBP18.37■□□□□ 0.53
USP39-203ENST00000409470 TAF13Q15543 124 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 DCAF10Q5QP82 559 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 STPG1Q5TH74 334 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 LINGO2Q7L985 606 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 PRSS45Q7RTY3 260 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 OR10S1Q8NGN2 331 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 OR2M2Q96R28 347 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 FAM206AQ9NX38 181 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ABI3Q9P2A4 366 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 ASH2LQ9UBL3 628 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 IL17BQ9UHF5 180 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 FOXJ3Q9UPW0 622 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 CACNG2Q9Y698 323 aa18.37■□□□□ 0.53
USP39-203ENST00000409470 P2RY10O00398 339 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 CCNKO75909 580 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 HSD11B1P28845 292 aa18.36■□□□□ 0.53
USP39-203ENST00000409470 SRP9P49458 86 aaKnown RBP18.36■□□□□ 0.53
USP39-203ENST00000409470 AGFG1P52594 562 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms