RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 RAB5AP20339 215 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ELAVL4P26378 380 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 HTR1FP30939 366 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 MAT2AP31153 395 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 ATP6V1E1P36543 226 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 FEN1P39748 380 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 CRYBA2P53672 197 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GAS1P54826 345 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ADPRHP54922 357 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 CDH11P55287 796 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 SRSF4Q08170 494 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 ACSM2AQ08AH3 577 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GAGE1Q13065 139 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ZNF235Q14590 738 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GANABQ14697 944 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 RHEBQ15382 184 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 USF2Q15853 346 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 PNLIPRP3Q17RR3 467 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ZXDCQ2QGD7 858 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 VWA2Q5GFL6 755 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ENTPD8Q5MY95 495 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 FAM46CQ5VWP2 391 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 LYPLAL1Q5VWZ2 237 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 C9orf57Q5W0N0 161 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 NSUN5P2Q63ZY6 315 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ACSM2BQ68CK6 577 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 AWAT2Q6E213 333 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 OR52W1Q6IF63 320 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ZCCHC12Q6PEW1 402 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 PAPD4Q6PIY7 484 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 ENPP7Q6UWV6 458 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 METTL7BQ6UX53 244 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 NPSR1Q6W5P4 371 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GLT6D1Q7Z4J2 308 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 DCXRQ7Z4W1 244 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ADCK2Q7Z695 626 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 FBXO16Q8IX29 292 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 BEST3Q8N1M1 668 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 COMMD1Q8N668 190 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 INO80EQ8NBZ0 244 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 SDR9C7Q8NEX9 313 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 OR5T3Q8NGG3 340 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 OR56B1Q8NGI3 324 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 OR13C4Q8NGS5 318 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 TERB2Q8NHR7 220 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 NFKBIDQ8NI38 313 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ZNF671Q8TAW3 534 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ADAMTS18Q8TE60 1221 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ESAMQ96AP7 390 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 VOPP1Q96AW1 172 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ZNF845Q96IR2 970 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 CCNL2Q96S94 520 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 MAP3K3Q99759 626 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 TLNRD1Q9H1K6 362 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 OR52A5Q9H2C5 316 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 SLC32A1Q9H598 525 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 PRORYQ9H606 182 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 TMEM185BQ9H7F4 350 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 SFXN1Q9H9B4 322 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 BEX1Q9HBH7 125 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 TMEM100Q9NV29 134 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 FLVCR2Q9UPI3 526 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 SLC35A3Q9Y2D2 325 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 TMED3Q9Y3Q3 217 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ARL5AQ9Y689 179 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ADAMTS9Q9P2N4 1935 aa4.9□□□□□ -1.63
CLK1-202ENST00000409403 A0A087WV48 116 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 TRBV4-1A0A0J9YWV2 114 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 C2orf92A0A1B0GVN3 265 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 F5H0A9 414 aaPredicted RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 PEX12O00623 359 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 CCL22O00626 93 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 EMC8O43402 210 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PPIHO43447 177 aaKnown RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 TGOLN2O43493 480 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 HBP1O60381 514 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 DNAJB6O75190 326 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 LRATO95237 230 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 CXCL14O95715 111 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PMS2P2O95744 297 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 OPN1SWP03999 348 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 MMP2P08253 660 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 ANKRD34CP0C6C1 535 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 CD79AP11912 226 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 C6P13671 934 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PAX1P15863 534 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 ZNF7P17097 686 aaPredicted RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 CSRP1P21291 193 aaKnown RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 FGF7P21781 194 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 CPT2P23786 658 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 MAS1LP35410 378 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 DLSTP36957 453 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 OR1E2P47887 323 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 CAV2P51636 162 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 MVDP53602 400 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 PNLIPRP2P54317 469 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 RGS8P57771 180 aaPredicted RBP4.89□□□□□ -1.63
CLK1-202ENST00000409403 SLC26A5P58743 744 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 EFNB1P98172 346 aa4.89□□□□□ -1.63
CLK1-202ENST00000409403 SORDQ00796 357 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms