RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 RBBP9O75884 186 aa8.8□□□□□ -1
MSH2-202ENST00000406134 SPARCP09486 303 aa8.8□□□□□ -1
MSH2-202ENST00000406134 CXCR1P25024 350 aa8.8□□□□□ -1
MSH2-202ENST00000406134 CD38P28907 300 aa8.8□□□□□ -1
MSH2-202ENST00000406134 PNLIPRP2P54317 469 aa8.8□□□□□ -1
MSH2-202ENST00000406134 SRSF4Q08170 494 aaKnown RBP8.8□□□□□ -1
MSH2-202ENST00000406134 TDGQ13569 410 aa8.8□□□□□ -1
MSH2-202ENST00000406134 RAB11BQ15907 218 aa8.8□□□□□ -1
MSH2-202ENST00000406134 SLC22A6Q4U2R8 563 aa8.8□□□□□ -1
MSH2-202ENST00000406134 C14orf28Q4W4Y0 310 aa8.8□□□□□ -1
MSH2-202ENST00000406134 OR10K2Q6IF99 312 aa8.8□□□□□ -1
MSH2-202ENST00000406134 ZNF529Q6P280 563 aa8.8□□□□□ -1
MSH2-202ENST00000406134 C3P1Q6ZMU1 363 aa8.8□□□□□ -1
MSH2-202ENST00000406134 TMUB2Q71RG4 321 aa8.8□□□□□ -1
MSH2-202ENST00000406134 MAMDC2Q7Z304 686 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 NFAM1Q8NET5 270 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 LILRB1Q8NHL6 650 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 ASB17Q8WXJ9 295 aa8.8□□□□□ -1
MSH2-202ENST00000406134 POFUT1Q9H488 388 aa8.8□□□□□ -1
MSH2-202ENST00000406134 MED9Q9NWA0 146 aa8.8□□□□□ -1
MSH2-202ENST00000406134 MSRAQ9UJ68 235 aa8.8□□□□□ -1
MSH2-202ENST00000406134 NUP50Q9UKX7 468 aa8.8□□□□□ -1
MSH2-202ENST00000406134 MAB21L2Q9Y586 359 aa8.8□□□□□ -1
MSH2-202ENST00000406134 C2orf72A6NCS6 295 aa8.8□□□□□ -1
MSH2-202ENST00000406134 METTL12A8MUP2 240 aa8.8□□□□□ -1
MSH2-202ENST00000406134 A8MXK9 166 aa8.8□□□□□ -1
MSH2-202ENST00000406134 GOSR2O14653 212 aa8.8□□□□□ -1
MSH2-202ENST00000406134 CD27P26842 260 aa8.8□□□□□ -1
MSH2-202ENST00000406134 ADAM8P78325 824 aa8.8□□□□□ -1
MSH2-202ENST00000406134 PLCXD2Q0VAA5 305 aa8.8□□□□□ -1
MSH2-202ENST00000406134 EIF2B1Q14232 305 aaKnown RBP8.8□□□□□ -1
MSH2-202ENST00000406134 C1orf100Q5SVJ3 147 aa8.8□□□□□ -1
MSH2-202ENST00000406134 CRIP3Q6Q6R5 217 aa8.8□□□□□ -1
MSH2-202ENST00000406134 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 SLC38A9Q8NBW4 561 aa8.8□□□□□ -1
MSH2-202ENST00000406134 TSEN15Q8WW01 171 aaKnown RBP8.8□□□□□ -1
MSH2-202ENST00000406134 RBPMSQ93062 196 aaKnown RBP8.8□□□□□ -1
MSH2-202ENST00000406134 ZNF501Q96CX3 271 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 MVB12AQ96EY5 273 aa8.8□□□□□ -1
MSH2-202ENST00000406134 BARX1Q9HBU1 254 aaPredicted RBP8.8□□□□□ -1
MSH2-202ENST00000406134 FAM206AQ9NX38 181 aa8.8□□□□□ -1
MSH2-202ENST00000406134 COQ3Q9NZJ6 369 aa8.8□□□□□ -1
MSH2-202ENST00000406134 B3GAT1Q9P2W7 334 aa8.8□□□□□ -1
MSH2-202ENST00000406134 B3GALT1Q9Y5Z6 326 aa8.8□□□□□ -1
MSH2-202ENST00000406134 NCOA6Q14686 2063 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 IGHV3-20A0A0C4DH32 117 aa8.79□□□□□ -1
MSH2-202ENST00000406134 hCG_1807616A0A1W2PRN6 198 aa8.79□□□□□ -1
MSH2-202ENST00000406134 A8MVM7 634 aa8.79□□□□□ -1
MSH2-202ENST00000406134 B8ZZF3 427 aa8.79□□□□□ -1
MSH2-202ENST00000406134 AKAIN1P0CW23 69 aa8.79□□□□□ -1
MSH2-202ENST00000406134 P2RY4P51582 365 aa8.79□□□□□ -1
MSH2-202ENST00000406134 NXPH1P58417 271 aa8.79□□□□□ -1
MSH2-202ENST00000406134 SLC26A5P58743 744 aa8.79□□□□□ -1
MSH2-202ENST00000406134 GLYATL3Q5SZD4 288 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ARHGAP40Q5TG30 622 aa8.79□□□□□ -1
MSH2-202ENST00000406134 STEAP1BQ6NZ63 245 aa8.79□□□□□ -1
MSH2-202ENST00000406134 GKN2Q86XP6 184 aa8.79□□□□□ -1
MSH2-202ENST00000406134 METTL21AQ8WXB1 218 aa8.79□□□□□ -1
MSH2-202ENST00000406134 AQP3Q92482 292 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ATPIF1Q9UII2 106 aa8.79□□□□□ -1
MSH2-202ENST00000406134 R4GMQ9 66 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ETV2O00321 342 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 GTF2F2P13984 249 aa8.79□□□□□ -1
MSH2-202ENST00000406134 IL12BP29460 328 aa8.79□□□□□ -1
MSH2-202ENST00000406134 PTGDSP41222 190 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ARRB1P49407 418 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 DCAF7P61962 342 aa8.79□□□□□ -1
MSH2-202ENST00000406134 RAB30Q15771 203 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ATPAF1Q5TC12 328 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 SLC18B1Q6NT16 456 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ARSKQ6UWY0 536 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ZNF813Q6ZN06 617 aa8.79□□□□□ -1
MSH2-202ENST00000406134 GRINAQ7Z429 371 aa8.79□□□□□ -1
MSH2-202ENST00000406134 MSANTD3Q96H12 275 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ALX4Q9H161 411 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 EMC9Q9Y3B6 208 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ARPC4-TTLL3A0A0A6YYG9 625 aa8.79□□□□□ -1
MSH2-202ENST00000406134 M0QYG6 137 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ARPC5O15511 151 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ZNF217O75362 1048 aa8.79□□□□□ -1
MSH2-202ENST00000406134 S100A11P31949 105 aa8.79□□□□□ -1
MSH2-202ENST00000406134 HSD11B2P80365 405 aa8.79□□□□□ -1
MSH2-202ENST00000406134 ZP4Q12836 540 aa8.79□□□□□ -1
MSH2-202ENST00000406134 SQSTM1Q13501 440 aa8.79□□□□□ -1
MSH2-202ENST00000406134 C1orf189Q5VU69 101 aa8.79□□□□□ -1
MSH2-202ENST00000406134 C17orf107Q6ZR85 190 aa8.79□□□□□ -1
MSH2-202ENST00000406134 DTX1Q86Y01 620 aa8.79□□□□□ -1
MSH2-202ENST00000406134 LINC00346Q8IVM7 164 aa8.79□□□□□ -1
MSH2-202ENST00000406134 MEIOBQ8N635 442 aa8.79□□□□□ -1
MSH2-202ENST00000406134 TMEM229BQ8NBD8 167 aa8.79□□□□□ -1
MSH2-202ENST00000406134 OR8S1Q8NH09 359 aa8.79□□□□□ -1
MSH2-202ENST00000406134 DUSP19Q8WTR2 217 aa8.79□□□□□ -1
MSH2-202ENST00000406134 C15orf40Q8WUR7 153 aa8.79□□□□□ -1
MSH2-202ENST00000406134 UQCC2Q9BRT2 126 aa8.79□□□□□ -1
MSH2-202ENST00000406134 FOXQ1Q9C009 403 aa8.79□□□□□ -1
MSH2-202ENST00000406134 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
MSH2-202ENST00000406134 ZMAT3Q9HA38 289 aaKnown RBP8.79□□□□□ -1
MSH2-202ENST00000406134 FANCFQ9NPI8 374 aa8.79□□□□□ -1
MSH2-202ENST00000406134 SDHAF2Q9NX18 166 aa8.79□□□□□ -1
MSH2-202ENST00000406134 FBXO4Q9UKT5 387 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms