RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RAB29O14966 203 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 P2RX6O15547 441 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 MLNRO43193 412 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 FOXS1O43638 330 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 GMDSO60547 372 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 PRKRAO75569 313 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 STK16O75716 305 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NSA2O95478 260 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 IGF1P05019 195 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SNRPAP09012 282 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CT62P0C5K7 136 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SMIM10L1P0DMW3 83 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 C1GALT1C1LP0DN25 315 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CDH1P12830 882 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NDUFB7P17568 137 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CXCR2P25025 360 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR3A3P47888 321 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CLDN17P56750 224 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 REEP5Q00765 189 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 GTF3C1Q12789 2109 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 GPR50Q13585 617 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CEACAM7Q14002 265 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ESPL1Q14674 2120 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 VAMP3Q15836 100 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NDUFA9Q16795 377 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ZNF385BQ569K4 471 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ABHD17BQ5VST6 288 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ZNF691Q5VV52 312 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NIPAL1Q6NVV3 410 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 TMEM64Q6YI46 380 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 DEF8Q6ZN54 512 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CCDC121Q6ZUS5 278 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SHFQ7M4L6 423 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 COX8CQ7Z4L0 72 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 PRSS35Q8N3Z0 413 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 LNX2Q8N448 690 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CPSF7Q8N684 471 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CSNK1A1LQ8N752 337 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SNX31Q8N9S9 440 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 RELL2Q8NC24 303 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR5R1Q8NH85 324 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NT5CQ8TCD5 201 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 KCTD4Q8WVF5 259 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 APOBEC4Q8WW27 367 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ASB10Q8WXI3 467 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 EXTL1Q92935 676 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SMIM10Q96HG1 83 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 AIF1LQ9BQI0 150 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR2B2Q9GZK3 357 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 DRC3Q9H069 523 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 ILKAPQ9H0C8 392 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CENPHQ9H3R5 247 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 WDR55Q9H6Y2 383 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 MSL2Q9HCI7 577 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 AKIP1Q9NQ31 210 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 INPP5EQ9NRR6 644 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 STARD5Q9NSY2 213 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 PARPBPQ9NWS1 579 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NUDT4Q9NZJ9 180 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NTMQ9P121 344 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 MYEF2Q9P2K5 600 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NXT1Q9UKK6 140 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 FZR1Q9UM11 496 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 RNF6Q9Y252 685 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 TSC22D4Q9Y3Q8 395 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRRC42Q9Y546 428 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 POLEQ07864 2286 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 TENM4Q6N022 2769 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NUP214P35658 2090 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRRK2Q5S007 2527 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 MYOCOSA0A1B0GUC4 107 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 UNC119BA6NIH7 251 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR6C70A6NIJ9 312 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 DBX1A6NMT0 343 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 TRIM49D1C9J1S8 452 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 RFXANKO14593 260 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 IMPA2O14732 288 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 SNAI2O43623 268 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 AIREO43918 545 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 ZIC3O60481 467 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 CEACAM4O75871 244 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 CLDN9O95484 217 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 TBX6O95947 436 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 PLAUP00749 431 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 UMODP07911 640 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 SERPINA6P08185 405 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 RBP1P09455 135 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 SLC35G6P0C7Q6 338 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 HSMCR30P0CW71 290 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 JUNBP17275 347 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 DCKP27707 260 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 FOLR3P41439 243 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 GDF5P43026 501 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 P2RY1P47900 373 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 NPBWR2P48146 333 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 EFNB2P52799 333 aa4.67□□□□□ -1.66
HMGB3P7-201ENST00000400214 CDH12P55289 794 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms