RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PPOXP50336 477 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 AQP6Q13520 282 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GK3PQ14409 553 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MAD2L1BPQ15013 274 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SLC36A3Q495N2 470 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SPATA46Q5T0L3 261 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 C1orf146Q5VVC0 180 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DNM1P34Q6PK57 102 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZBTB46Q86UZ6 589 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LNX2Q8N448 690 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR1J1Q8NGS3 322 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZNRF4Q8WWF5 429 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SLC7A6Q92536 515 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DDOQ99489 341 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 BCL2L14Q9BZR8 327 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RACGAP1Q9H0H5 632 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MMADHCQ9H3L0 296 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TPK1Q9H3S4 243 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ARRDC5A6NEK1 342 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SYNGR3O43761 229 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NGFP01138 241 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 HTR5AP47898 357 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 EVX1P49640 407 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GLO1Q04760 184 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CD300LDQ6UXZ3 194 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 IQCF1Q8N6M8 205 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SLC37A3Q8NCC5 494 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SLC26A10Q8NG04 563 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR2T33Q8NG76 320 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR10H5Q8NGA6 315 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR51L1Q8NGJ5 315 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RHNO1Q9BSD3 238 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 POLR1DQ9Y2S0 133 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FKBP7Q9Y680 259 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NIPBLQ6KC79 2804 aaeCLIP12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 H3BN98 237 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 M0R233 179 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LY6G6DO95868 133 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ZNF250P15622 560 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PYCR1P32322 319 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TEKQ02763 1124 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 COX10Q12887 443 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CCNIQ14094 377 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CRMP1Q14194 572 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CCDC92Q53HC0 331 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LYPD4Q6UWN0 246 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CLEC9AQ6UXN8 241 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 RFPL4BQ6ZWI9 263 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ASRGL1Q7L266 308 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR9Q1Q8NGQ5 310 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 ABHD4Q8TB40 342 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SYNPRQ8TBG9 265 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 FAM168AQ92567 244 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 UTP4Q969X6 686 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 WACQ9BTA9 647 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NF1P21359 2839 aa12.08□□□□□ -0.48
HLA-DQB1-202ENST00000399079 IGLV3-9A0A075B6K5 115 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 HLA-DQA2P01906 255 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 GYPBP06028 91 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 DBHP09172 617 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CLUP10909 449 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 NAT2P11245 290 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 POU1F1P28069 291 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MPV17P39210 176 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 RPS27P42677 84 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CARTPTQ16568 116 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TMEM255AQ5JRV8 349 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 CCDC121Q6ZUS5 278 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 PROKR2Q8NFJ6 384 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 SLC25A40Q8TBP6 338 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 TEX47Q8TBZ9 253 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 C10orf105Q8TEF2 133 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 RBM4Q9BWF3 364 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 OR2J1Q9GZK6 312 aa12.07□□□□□ -0.48
HLA-DQB1-202ENST00000399079 MRPL22Q9NWU5 206 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms