RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TBCCD1Q9NVR7 557 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 TAAR3PQ9P1P4 343 aa11.95□□□□□ -0.5
SEC13-204ENST00000397099 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 H7C1C5 153 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 SOCS2O14508 198 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 IFNA2P01563 188 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
SEC13-204ENST00000397099 CTLA4P16410 223 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 GSTM3P21266 225 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 ALDH3B1P43353 468 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 RGS6P49758 472 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 FXYD6P3P58550 94 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 LCN6P62502 163 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 TRAP1Q12931 704 aaKnown RBP11.94□□□□□ -0.5
SEC13-204ENST00000397099 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 CHRFAM7AQ494W8 412 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 SLC36A3Q495N2 470 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 FAM166AQ6J272 317 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
SEC13-204ENST00000397099 ICA1LQ8NDH6 482 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 GJC3Q8NFK1 279 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 RASD2Q96D21 266 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 MARS2Q96GW9 593 aaKnown RBP11.94□□□□□ -0.5
SEC13-204ENST00000397099 IFT27Q9BW83 186 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 TPK1Q9H3S4 243 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 PLEK2Q9NYT0 353 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 ZDHHC8Q9ULC8 765 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 LYVE1Q9Y5Y7 322 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 ATRQ13535 2644 aa11.94□□□□□ -0.5
SEC13-204ENST00000397099 DOK2O60496 412 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 ABHD16AO95870 558 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 ADH4P08319 380 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 IGHV4-31P0DP07 118 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 RAP2AP10114 183 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 PCMT1P22061 227 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 PPP1CBP62140 327 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 ZNF774Q6NX45 483 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 ZNF620Q6ZNG0 422 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 TRPM8Q7Z2W7 1104 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 ABHD4Q8TB40 342 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 GPA33Q99795 319 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 EGLN1Q9GZT9 426 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 NUAK2Q9H093 628 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 REEP1Q9H902 201 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 DECR2Q9NUI1 292 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 FAM53CQ9NYF3 392 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 TAS2R1Q9NYW7 299 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 IL20Q9NYY1 176 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 IL20RAQ9UHF4 553 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 KCNG2Q9UJ96 466 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 KCNS2Q9ULS6 477 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 FZR1Q9UM11 496 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
SEC13-204ENST00000397099 POLR1DQ9Y2S0 133 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 CDH10Q9Y6N8 788 aa11.93□□□□□ -0.5
SEC13-204ENST00000397099 IGHV4-61A0A0C4DH41 118 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 OR6C6A6NF89 314 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 AQP12BA6NM10 295 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 CCNB2O95067 398 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 PPP1R3DO95685 299 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 CLPTM1O96005 669 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 T-ENOLP0DO92 83 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 NAT2P11245 290 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 HNF1AP20823 631 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 WNT5AP41221 380 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 CDKN2AP42771 156 aaKnown RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 HTR5AP47898 357 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 ZNF81P51508 661 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 COX10Q12887 443 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 ECH1Q13011 328 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 MAD2L1BPQ15013 274 aaPredicted RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 ELFN2Q5R3F8 820 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 OR2T5Q6IEZ7 315 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 RINLQ6ZS11 566 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 RASSF6Q6ZTQ3 369 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 PTCHD4Q6ZW05 846 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 VASH1Q7L8A9 365 aaPredicted RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 CXXC5Q7LFL8 322 aaKnown RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 AQP12AQ8IXF9 295 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 ZNF101Q8IZC7 436 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 OR2T29Q8NH02 315 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 KLF14Q8TD94 323 aaPredicted RBP11.92□□□□□ -0.5
SEC13-204ENST00000397099 SAMD8Q96LT4 415 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 HDHD2Q9H0R4 259 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 OR51B6Q9H340 312 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 RERGLQ9H628 205 aa11.92□□□□□ -0.5
SEC13-204ENST00000397099 YY1AP1Q9H869 796 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms