RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 RFKQ969G6 155 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 UBE2FQ969M7 185 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 TMEM45BQ96B21 275 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 OTULINQ96BN8 352 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 LRR1Q96L50 414 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 TSPAN32Q96QS1 320 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 SF3B5Q9BWJ5 86 aaKnown RBP8.96□□□□□ -0.98
NEDD8-202ENST00000396828 NELFAQ9H3P2 528 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 PARPBPQ9NWS1 579 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 CDC42EP3Q9UKI2 254 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF346Q9UL40 294 aaKnown RBP8.96□□□□□ -0.98
NEDD8-202ENST00000396828 MYRFQ9Y2G1 1151 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 AMDHD2Q9Y303 409 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 TPRKBQ9Y3C4 175 aa8.96□□□□□ -0.98
NEDD8-202ENST00000396828 A0A096LPE4 126 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 IGHV4-61A0A0C4DH41 118 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 TEX13CA0A0J9YWL9 993 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 A0A1W2PPZ6 126 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 M0R129 80 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 AKAP8O43823 692 aaKnown RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 UPK3AO75631 287 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 RENP00797 406 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 CELA3BP08861 270 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 RPSAP08865 295 aaKnown RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 IFNGR1P15260 489 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 HIST1H1CP16403 213 aaKnown RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 GABRB1P18505 474 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 USF1P22415 310 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 CALCRP30988 508 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 EFNB1P98172 346 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 GGTLC2Q14390 218 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 TBRG1Q3YBR2 411 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 NXNL2Q5VZ03 156 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 PLBD1Q6P4A8 553 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 LEG1Q6P5S2 330 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 CREB3L2Q70SY1 520 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 FAM122BQ7Z309 247 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 ADCK1Q86TW2 530 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 GID4Q8IVV7 300 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 ZCCHC24Q8N2G6 241 aaKnown RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 C17orf78Q8N4C9 275 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 SDR9C7Q8NEX9 313 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 BPIFB6Q8NFQ5 453 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 OR1K1Q8NGR3 316 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 APH1BQ8WW43 257 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 TMEM158Q8WZ71 300 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 BCL2L2Q92843 193 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 RASD2Q96D21 266 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 MSI2Q96DH6 328 aaKnown RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 Q96M85 177 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 ALKBH3Q96Q83 286 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 BEX2Q9BXY8 128 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 CHODLQ9H9P2 273 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 B3GAT1Q9P2W7 334 aa8.95□□□□□ -0.98
NEDD8-202ENST00000396828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.95□□□□□ -0.98
NEDD8-202ENST00000396828 MAGEA13PA6NCF6 341 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF726A6NNF4 738 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 SLC1A7O00341 560 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 PRODHO43272 600 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 AHCYL1O43865 530 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 LMX1BO60663 402 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 FAM20BO75063 409 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ENTPD6O75354 484 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 WBP4O75554 376 aaKnown RBP8.94□□□□□ -0.98
NEDD8-202ENST00000396828 SLC2A10O95528 541 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 CCDC159P0C7I6 412 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 NR2C1P13056 603 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 HLA-DOBP13765 273 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 EEF1B2P24534 225 aaKnown RBP8.94□□□□□ -0.98
NEDD8-202ENST00000396828 FMO3P31513 532 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 NR4A2P43354 598 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 BIDP55957 195 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 TGFBR3Q03167 851 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 CRMP1Q14194 572 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ADIPOQQ15848 244 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 MESTQ5EB52 335 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ANKRD16Q6P6B7 361 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 VHLLQ6RSH7 139 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 CPOQ8IVL8 374 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 SLC37A3Q8NCC5 494 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF519Q8TB69 540 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ASB10Q8WXI3 467 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF566Q969W8 418 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-202ENST00000396828 BOD1Q96IK1 185 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 ZNF582Q96NG8 517 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-202ENST00000396828 SNX18Q96RF0 628 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 NMNAT3Q96T66 252 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 SHARPINQ9H0F6 387 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 CA10Q9NS85 328 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 PLCXD1Q9NUJ7 323 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 TMEM160Q9NX00 188 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 DNAJC27Q9NZQ0 273 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 AASSQ9UDR5 926 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 RPL36Q9Y3U8 105 aaKnown RBP8.94□□□□□ -0.98
NEDD8-202ENST00000396828 PCDHGB5Q9Y5G0 923 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 PMF1-BGLAPU3KQ54 211 aa8.94□□□□□ -0.98
NEDD8-202ENST00000396828 IRGMA1A4Y4 181 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms