RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 NKX2-4Q9H2Z4 354 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 LDAHQ9H6V9 325 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 MSRAQ9UJ68 235 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 CD207Q9UJ71 328 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 MMACHCQ9Y4U1 282 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 MGMTP16455 207 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 BLKP51451 505 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 ZP2Q05996 745 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 SRSF4Q08170 494 aaKnown RBP14.09□□□□□ -0.15
HOXA3-202ENST00000396352 DHRS2Q13268 280 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 ZNF546Q86UE3 836 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 ST8SIA2Q92186 375 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 MRPL38Q96DV4 380 aaKnown RBP14.09□□□□□ -0.15
HOXA3-202ENST00000396352 WDR13Q9H1Z4 485 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 C12orf4Q9NQ89 552 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 MYEF2Q9P2K5 600 aaKnown RBP14.09□□□□□ -0.15
HOXA3-202ENST00000396352 TRIOO75962 3097 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 TMED7-TICAM2A0A0A6YYA0 188 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 DCDC2BA2VCK2 349 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 H3BMH7 237 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 PLPP3O14495 311 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 IGLV3-19P01714 112 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 GP1BBP13224 206 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 PGCP20142 388 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 OR10K2Q6IF99 312 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 C17orf107Q6ZR85 190 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 OR52H1Q8NGJ2 320 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 RELTQ969Z4 430 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 ZNF587Q96SQ5 575 aaPredicted RBP14.09□□□□□ -0.15
HOXA3-202ENST00000396352 SLC6A7Q99884 636 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 SLC25A32Q9H2D1 315 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 SLCO5A1Q9H2Y9 848 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 G6PC2Q9NQR9 355 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 GLS2Q9UI32 602 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 TMED7Q9Y3B3 224 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 EMC9Q9Y3B6 208 aa14.09□□□□□ -0.15
HOXA3-202ENST00000396352 LOC390937A0A1W2PQ73 354 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 WIPF3A6NGB9 483 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 ZNF736B4DX44 427 aaPredicted RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 LMX1BO60663 402 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 CYB5AP00167 134 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 ACHEP22303 614 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 NR0B1P51843 470 aaKnown RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 SPOCK1Q08629 439 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 C1orf140Q5VVS0 124 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 CORO6Q6QEF8 472 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 TTLL10Q6ZVT0 673 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 BEST3Q8N1M1 668 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 OR13C3Q8NGS6 347 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 PDE7BQ9NP56 450 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 R4GMQ9 66 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 SPEGQ15772 3267 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 LAMA1P25391 3075 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 UBBP0CG47 229 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 UBCP0CG48 685 aaKnown RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 ZNF28P17035 718 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 POLR2HP52434 150 aaKnown RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 RPS27AP62979 156 aaKnown RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 UBA52P62987 128 aaKnown RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 SHHQ15465 462 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 KLHDC7BQ96G42 594 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 CMKLR1Q99788 373 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 OR11A1Q9GZK7 315 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 BARX1Q9HBU1 254 aaPredicted RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 CUTCQ9NTM9 273 aa14.08□□□□□ -0.16
HOXA3-202ENST00000396352 ZNF107Q9UII5 783 aaPredicted RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 COA3Q9Y2R0 106 aaPredicted RBP14.08□□□□□ -0.16
HOXA3-202ENST00000396352 LOC107986453A0A1B0GWG9 222 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 OR5H14A6NHG9 310 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 LILRA5A6NI73 299 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 HLA-DOBP13765 273 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 JMJD6Q6NYC1 403 aaPredicted RBP14.07□□□□□ -0.16
HOXA3-202ENST00000396352 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 PXT1Q8NFP0 134 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 SLC38A3Q99624 504 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 TBL1XR1Q9BZK7 514 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 A0A0A6YYH2 397 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 TMEM235A6NFC5 223 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 TLCD2A6NGC4 264 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 A6NJ64 397 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 SHISA7A6NL88 538 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 SMAD9O15198 467 aaKnown RBP14.07□□□□□ -0.16
HOXA3-202ENST00000396352 ISG15P05161 165 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 GLO1Q04760 184 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 ELAVL1Q15717 326 aaKnown RBP14.07□□□□□ -0.16
HOXA3-202ENST00000396352 C1orf100Q5SVJ3 147 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 WDFY1Q8IWB7 410 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 OR4S1Q8NGB4 309 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 OR4D6Q8NGJ1 314 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 MRGPRFQ96AM1 343 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 HHLA2Q9UM44 414 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 TNFSF18Q9UNG2 199 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 VSIG4Q9Y279 399 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 FARSAQ9Y285 508 aaKnown RBP14.07□□□□□ -0.16
HOXA3-202ENST00000396352 LOC101059948A0A1B0GTJ6 334 aa14.07□□□□□ -0.16
HOXA3-202ENST00000396352 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms