RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 MGAQ8IWI9 3026 aa13.56□□□□□ -0.24
VAMP1-202ENST00000396308 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 E9PLN8 166 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 ATXN7O15265 892 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-202ENST00000396308 CD8BP10966 210 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 CD36P16671 472 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 CPEP16870 476 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 EDNRAP25101 427 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 CEACAM8P31997 349 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-202ENST00000396308 GRB2P62993 217 aaKnown RBP13.55□□□□□ -0.24
VAMP1-202ENST00000396308 ROM1Q03395 351 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 C9orf135Q5VTT2 229 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 GPR107Q5VW38 600 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 OTPQ5XKR4 325 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 TMEM53Q6P2H8 277 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 VWA1Q6PCB0 445 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 CORO6Q6QEF8 472 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 LRRN1Q6UXK5 716 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 SPATC1Q76KD6 591 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 RHOUQ7L0Q8 258 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 LINGO2Q7L985 606 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 ZNF420Q8TAQ5 688 aaPredicted RBP13.55□□□□□ -0.24
VAMP1-202ENST00000396308 TMIGD2Q96BF3 282 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 OPALINQ96PE5 141 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 ZNF649Q9BS31 505 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 RNF121Q9H920 327 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 PLSCR4Q9NRQ2 329 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 ACOXLQ9NUZ1 547 aa13.55□□□□□ -0.24
VAMP1-202ENST00000396308 LOC400499M0QZD8 3231 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PSMD9O00233 223 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 DVL2O14641 736 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RPP14O95059 124 aaKnown RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 IL18BPO95998 194 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 APOC1P02654 83 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PSMA1P25786 263 aaKnown RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 CD79BP40259 229 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 TGM4P49221 684 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RGS6P49758 472 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PMPCAQ10713 525 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ECH1Q13011 328 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 GPR50Q13585 617 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ENDOGQ14249 297 aaKnown RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RAB35Q15286 201 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 TRAM1Q15629 374 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 SEM1Q6ZVN7 128 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ZNF627Q7L945 461 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 CCDC36Q8IYA8 594 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ST7LQ8TDW4 575 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RAB2BQ8WUD1 216 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RNF133Q8WVZ7 376 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 RND1Q92730 232 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ZNF837Q96EG3 531 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PELI1Q96FA3 418 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 SH3GL3Q99963 347 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 BCL7BQ9BQE9 202 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 COMMD4Q9H0A8 199 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 HDHD2Q9H0R4 259 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ELOVL3Q9HB03 270 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 NDUFB11Q9NX14 153 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 SLCO1C1Q9NYB5 712 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PLEK2Q9NYT0 353 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 GTF2A1LQ9UNN4 478 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 LRP12Q9Y561 859 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 CELSR3Q9NYQ7 3312 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ZGRF1Q86YA3 2104 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ITPR1Q14643 2758 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
VAMP1-202ENST00000396308 PNMA8CA0A1B0GUJ8 204 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 SGCEO43556 437 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 DOK2O60496 412 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 TNFSF13O75888 250 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 UBL3O95164 117 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 CD53P19397 219 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 CELP19835 753 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ARR3P36575 388 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 TMBIM6P55061 237 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
VAMP1-202ENST00000396308 FOXF2Q12947 444 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 TPBGQ13641 420 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 P2RY6Q15077 328 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ELFN2Q5R3F8 820 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 LIPNQ5VXI9 398 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ARL9Q6T311 187 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 CFAP77Q6ZQR2 320 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 BTLAQ7Z6A9 289 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ZNF485Q8NCK3 441 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 HTRA1Q92743 480 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 ATF6BQ99941 703 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 FUNDC2Q9BWH2 189 aa13.53□□□□□ -0.24
VAMP1-202ENST00000396308 MOB1AQ9H8S9 216 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms