RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MAKP20794 623 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CNR1P21554 472 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 S100PP25815 95 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PCP4P48539 62 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 P2RX1P51575 399 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR1D5P58170 312 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SNRPEP62304 92 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 RPS27AP62979 156 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 UBA52P62987 128 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 STX4Q12846 297 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 HYAL4Q2M3T9 481 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SLC25A35Q3KQZ1 300 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 AVPI1Q5T686 147 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OLFML2AQ68BL7 652 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 NKAIN4Q8IVV8 208 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SKA3Q8IX90 412 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 C1orf162Q8NEQ5 155 aaPredicted RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 TMEM41AQ96HV5 264 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 ENKD1Q9H0I2 346 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 AUNIPQ9H7T9 357 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 C19orf25Q9UFG5 118 aaPredicted RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 KCNG2Q9UJ96 466 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SLC7A7Q9UM01 511 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 NPFFR2Q9Y5X5 522 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 FLVCR1Q9Y5Y0 555 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CENPVL1A0A0U1RR11 272 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 A0A1B0GVT2 93 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 TMEM218A2RU14 115 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 M0R296 226 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CDC42EP2O14613 210 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PHYHO14832 338 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 ZNF264O43296 627 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 HTR3BO95264 441 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CNOT4O95628 575 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 CRYBA1P05813 215 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CTSBP07858 339 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR2T7P0C7T2 308 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SP9P0CG40 484 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PRF1P14222 555 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 NT5EP21589 574 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 CDH11P55287 796 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 H2BFSP57053 126 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SNTB1Q13884 538 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 CSRP2Q16527 193 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 HIST3H3Q16695 136 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 RAB12Q6IQ22 244 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 KLBQ86Z14 1044 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SERPINA12Q8IW75 414 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR5L2Q8NGL0 311 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR2T27Q8NH04 317 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 GPR119Q8TDV5 335 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 SNX33Q8WV41 574 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 ASB13Q8WXK3 278 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 NANOS1Q8WY41 292 aaKnown RBP4.82□□□□□ -1.64
VPS41-203ENST00000395969 BPIFA2Q96DR5 249 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 MOGAT1Q96PD6 335 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 PIGMQ9H3S5 423 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 TAS2R3Q9NYW6 316 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 ABRACLQ9P1F3 81 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 TRPC4Q9UBN4 977 aa4.82□□□□□ -1.64
VPS41-203ENST00000395969 ACOD1A6NK06 481 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 C17orf105B2RV13 164 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PRR23D1E9PI22 279 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 ARPC1BO15143 372 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 FRS3O43559 492 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NDUFB2O95178 105 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 UTS2O95399 124 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 FBP1P09467 338 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 PRR23D2P0DMB1 279 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 MGMTP16455 207 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 APOBEC1P41238 236 aaKnown RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 PTGFRP43088 359 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DIO1P49895 249 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ACTA2P62736 377 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ACTG2P63267 376 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ROM1Q03395 351 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EGR4Q05215 589 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EGR3Q06889 387 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TOMM34Q15785 309 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 SGCBQ16585 318 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 HES5Q5TA89 166 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 LINC01590Q5TEZ4 76 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 SFRP4Q6FHJ7 346 aaPredicted RBP4.81□□□□□ -1.64
VPS41-203ENST00000395969 GRINAQ7Z429 371 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 ZAR1Q86SH2 424 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 MEIOBQ8N635 442 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 EID2Q8N6I1 236 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 MFSD8Q8NHS3 518 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 TMEM255BQ8WV15 326 aa4.81□□□□□ -1.64
VPS41-203ENST00000395969 SMPDL3BQ92485 455 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms