RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 MRPS18BQ9Y676 258 aaKnown RBP18.53■□□□□ 0.56
CLK3-202ENST00000395066 FRG2CA6NGY1 282 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 H3BUI4 141 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 IGKV3-11P04433 115 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ZNF546Q86UE3 836 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ASB5Q8WWX0 329 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 ABHD6Q9BV23 337 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 TBL1XR1Q9BZK7 514 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 CUTCQ9NTM9 273 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 LRP12Q9Y561 859 aa18.53■□□□□ 0.56
CLK3-202ENST00000395066 TRAV36DV7A0A075B6V5 113 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 ACHEP22303 614 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 DEFA5Q01523 94 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 FMODQ06828 376 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 FAM74A1Q5RGS3 127 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 LINC00346Q8IVM7 164 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 GABRG1Q8N1C3 465 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 GPR119Q8TDV5 335 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 NKD1Q969G9 470 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 ZNF285Q96NJ3 590 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 ALX4Q9H161 411 aaPredicted RBP18.52■□□□□ 0.56
CLK3-202ENST00000395066 GPR27Q9NS67 375 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 RASL12Q9NYN1 266 aa18.52■□□□□ 0.56
CLK3-202ENST00000395066 UNC13CQ8NB66 2214 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 A0A1W2PPC4 97 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 BLACEA4D250 179 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 BLKP51451 505 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 RPL27P61353 136 aaKnown RBP18.52■□□□□ 0.55
CLK3-202ENST00000395066 EBPQ15125 230 aaKnown RBP18.52■□□□□ 0.55
CLK3-202ENST00000395066 C1orf189Q5VU69 101 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 SLC18B1Q6NT16 456 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 RNF128Q8TEB7 428 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 C8orf44Q96CB5 159 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 DNTTIP1Q9H147 329 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 C1orf198Q9H425 327 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 MRTO4Q9UKD2 239 aaKnown RBP18.52■□□□□ 0.55
CLK3-202ENST00000395066 FARSAQ9Y285 508 aaKnown RBP18.52■□□□□ 0.55
CLK3-202ENST00000395066 COA3Q9Y2R0 106 aaPredicted RBP18.52■□□□□ 0.55
CLK3-202ENST00000395066 EMC9Q9Y3B6 208 aa18.52■□□□□ 0.55
CLK3-202ENST00000395066 LOC100509620A0A075B734 347 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 IGLV1-36A0A0B4J1U3 117 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 C10orf142B7Z368 130 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 ITGB2P05107 769 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 PLCXD2Q0VAA5 305 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 LY6G6FQ5SQ64 297 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 MAMDC2Q7Z304 686 aaPredicted RBP18.51■□□□□ 0.55
CLK3-202ENST00000395066 ZNF519Q8TB69 540 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 SLC25A28Q96A46 364 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 SEH1LQ96EE3 360 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 ZNF587Q96SQ5 575 aaPredicted RBP18.51■□□□□ 0.55
CLK3-202ENST00000395066 TAS2R3Q9NYW6 316 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 FAM74A7A6NL05 159 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 H0YIG0 161 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 EIF4E2O60573 245 aaKnown RBP18.51■□□□□ 0.55
CLK3-202ENST00000395066 PMS2P2O95744 297 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 ZNF28P17035 718 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 FAM74A3Q4VXF1 159 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 C12orf45Q8N5I9 185 aaPredicted RBP18.51■□□□□ 0.55
CLK3-202ENST00000395066 JAGN1Q8N5M9 183 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 CCDC107Q8WV48 283 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 SLC25A44Q96H78 314 aaPredicted RBP18.51■□□□□ 0.55
CLK3-202ENST00000395066 CMKLR1Q99788 373 aa18.51■□□□□ 0.55
CLK3-202ENST00000395066 TMED7-TICAM2A0A0A6YYA0 188 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 A0A0D9SG52 128 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 OR4E1P0C645 316 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 AGTR1P30556 359 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 NR0B2Q15466 257 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 NSDHLQ15738 373 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 LINC00518Q8N0U6 118 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 OR4S1Q8NGB4 309 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 GPX8Q8TED1 209 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 UPB1Q9UBR1 384 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 TMED7Q9Y3B3 224 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 FITM1A5D6W6 292 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 EIF1AYO14602 144 aaKnown RBP18.5■□□□□ 0.55
CLK3-202ENST00000395066 GP1BBP13224 206 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 FASLGP48023 281 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 CCR5P51681 352 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 LBX1P52954 281 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 TEX30Q5JUR7 227 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 FAM166AQ6J272 317 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 CORO6Q6QEF8 472 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 BEST3Q8N1M1 668 aa18.5■□□□□ 0.55
CLK3-202ENST00000395066 BARX1Q9HBU1 254 aaPredicted RBP18.5■□□□□ 0.55
CLK3-202ENST00000395066 TMEM82A0PJX8 343 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 MPTX1A8MV57 137 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 RAB3DO95716 219 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 AMY2AP04746 511 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 MYF5P13349 255 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 HTR2CP28335 458 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 STARP49675 285 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 MC2RQ01718 297 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 SGCBQ16585 318 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 NKPD1Q17RQ9 610 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 SCGB2B2Q4G0G5 96 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 COL13A1Q5TAT6 717 aaPredicted RBP18.49■□□□□ 0.55
CLK3-202ENST00000395066 HLA-DQA1Q5Y7H0 255 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 ELP2Q6IA86 826 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 TMEM17Q86X19 198 aa18.49■□□□□ 0.55
CLK3-202ENST00000395066 MNTQ99583 582 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms