RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PTDSS2Q9BVG9 487 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 OR8D2Q9GZM6 311 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 LDAHQ9H6V9 325 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 GLS2Q9UI32 602 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 MRPS18BQ9Y676 258 aaKnown RBP16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 PCDH15Q96QU1 1955 aa16.48■□□□□ 0.23
PCDHA1-202ENST00000394633 FRG2CA6NGY1 282 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 METTL12A8MUP2 240 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 OR6A2O95222 327 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 AMY2AP04746 511 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 CD1CP29017 333 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 RPL27P61353 136 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 GLYATL3Q5SZD4 288 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 FAM122CQ6P4D5 195 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 CATSPERDQ86XM0 798 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 PRMT8Q9NR22 394 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 COL5A1P20908 1838 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 CTLA4P16410 223 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ZXDAP98168 799 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ATPAF1Q5TC12 328 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 CFAP77Q6ZQR2 320 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 MAMDC2Q7Z304 686 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ZNF546Q86UE3 836 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 OR1J2Q8NGS2 313 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ST8SIA2Q92186 375 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ADIPOR1Q96A54 375 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC25A21Q9BQT8 299 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 LRP12Q9Y561 859 aa16.47■□□□□ 0.23
PCDHA1-202ENST00000394633 ARPC4-TTLL3A0A0A6YYG9 625 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 ATP6V1G2-DDX39BF2Z307 99 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 DOK2O60496 412 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 EIF4E2O60573 245 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 CD37P11049 281 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 ACHEP22303 614 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 RORAP35398 523 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 ADAM8P78325 824 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 BIKQ13323 160 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 SGCBQ16585 318 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 MARCH3Q86UD3 253 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 TMEM151BQ8IW70 566 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 OR51A2Q8NGJ7 313 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 EDAQ92838 391 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 ABHD6Q9BV23 337 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 NRSN2Q9GZP1 204 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 SCPEP1Q9HB40 452 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 MYOZ1Q9NP98 299 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 FBXO4Q9UKT5 387 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 A0A1B0GTI1 187 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 NUPL2O15504 423 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 CD8AP01732 235 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 UBBP0CG47 229 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 UBCP0CG48 685 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 MGMTP16455 207 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 FSTP19883 344 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 CD27P26842 260 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 RIDAP52758 137 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 RPS27AP62979 156 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 UBA52P62987 128 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 EIF2B1Q14232 305 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 MOGAT2Q3SYC2 334 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 BEST3Q8N1M1 668 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 PXT1Q8NFP0 134 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 TSLPQ969D9 159 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 KLHDC7BQ96G42 594 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC25A44Q96H78 314 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 GAL3ST4Q96RP7 486 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 ZMAT3Q9HA38 289 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 VSX1Q9NZR4 365 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 MYEF2Q9P2K5 600 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 CKLFQ9UBR5 152 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 PLCL2Q9UPR0 1127 aa16.46■□□□□ 0.23
PCDHA1-202ENST00000394633 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CDC14CA4D256 554 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 LDLRAD4O15165 306 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 SMAD9O15198 467 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CAPZBP47756 277 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 KCTD18Q6PI47 426 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 ATRAIDQ6UW56 229 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 C17orf107Q6ZR85 190 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 OR5M8Q8NGP6 311 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 FAM174AQ8TBP5 190 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 AIFM2Q9BRQ8 373 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 EDEM2Q9BV94 578 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 LRRC61Q9BV99 259 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 KLK13Q9UKR3 277 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 DCDC2BA2VCK2 349 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 TOR1AO14656 332 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 SLC25A12O75746 678 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 NUDT14O95848 222 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CD2P06729 351 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 ZNF28P17035 718 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 PMPCAQ10713 525 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 DHRS2Q13268 280 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 FAM74A1Q5RGS3 127 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 OR10K2Q6IF99 312 aa16.45■□□□□ 0.22
PCDHA1-202ENST00000394633 ADGRE4PQ86SQ3 457 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms