RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RNF128Q8TEB7 428 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 UTP23Q9BRU9 249 aaKnown RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 EMC6Q9BV81 110 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 GSX2Q9BZM3 304 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF768Q9H5H4 540 aaKnown RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC22A11Q9NSA0 550 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 ZNF275Q9NSD4 429 aaPredicted RBP12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 VDAC3Q9Y277 283 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 MAB21L2Q9Y586 359 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 RTTNQ86VV8 2226 aa12.08□□□□□ -0.48
GTF2F1-201ENST00000394456 TNRC6BQ9UPQ9 1833 aaKnown RBP12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 ALG1L2C9J202 215 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 PLPP3O14495 311 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 NPIPB7O75200 414 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 GIPP09681 153 aaPredicted RBP12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 ACSM4P0C7M7 580 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 RRASP10301 218 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 FBXW4P57775 412 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SGCBQ16585 318 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 ARSKQ6UWY0 536 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 C3P1Q6ZMU1 363 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 DEFB123Q8N688 67 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 CLEC1AQ8NC01 280 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 CMKLR1Q99788 373 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 DHRS9Q9BPW9 319 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 MS4A7Q9GZW8 240 aaPredicted RBP12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SEMA5BQ9P283 1151 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 DHDHQ9UQ10 334 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 A0A1W2PQM1 296 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC17A2O00624 439 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 CPN1P15169 458 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 PRSS3P35030 304 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 C4orf46Q504U0 113 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 NHLRC3Q5JS37 347 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 PXDC1Q5TGL8 231 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 FAM166AQ6J272 317 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 UBALD2Q8IYN6 164 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 ACBD4Q8NC06 268 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SEH1LQ96EE3 360 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 SLC25A44Q96H78 314 aaPredicted RBP12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 OR6C1Q96RD1 312 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 POFUT1Q9H488 388 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 EXO5Q9H790 373 aa12.07□□□□□ -0.48
GTF2F1-201ENST00000394456 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 LOC100289279A0A1B0GTE1 492 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM235A6NFC5 223 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 P2RY10O00398 339 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 MNDAP41218 407 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CCL7P80098 99 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 SORDQ00796 357 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 MFSD13AQ14CX5 517 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 NKPD1Q17RQ9 610 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 HLA-BQ31612 363 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 STEAP1BQ6NZ63 245 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM71Q6P5X7 295 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 COX15Q7KZN9 410 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CATSPERDQ86XM0 798 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 GABRG1Q8N1C3 465 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 JAGN1Q8N5M9 183 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 EID2Q8N6I1 236 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 DAZLQ92904 295 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TXNIPQ9H3M7 391 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 COPS7AQ9UBW8 275 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 FARSAQ9Y285 508 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 SPEF1Q9Y4P9 236 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TMEM14AQ9Y6G1 99 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 U3KQA8 63 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CCSO14618 274 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 FADS1O60427 444 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 IL5P05113 134 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CFIP05156 583 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 OR7A5Q15622 319 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 LIN54Q6MZP7 749 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 TMUB2Q71RG4 321 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 OR4D6Q8NGJ1 314 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 STT3BQ8TCJ2 826 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 FAM46BQ96A09 425 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 SOX7Q9BT81 388 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 ARL6Q9H0F7 186 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 GPN1Q9HCN4 374 aaPredicted RBP12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 DIABLOQ9NR28 239 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 CENPMQ9NSP4 180 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 MED11Q9P086 117 aa12.06□□□□□ -0.48
GTF2F1-201ENST00000394456 EMC3Q9P0I2 261 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms