RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 ATF1P18846 271 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 MAGEA5P43359 124 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 LHX2P50458 406 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 XKRXQ6PP77 449 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
CCT4-201ENST00000394440 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 RDH10Q8IZV5 341 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 HAS2Q92819 552 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 SLAMF6Q96DU3 332 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 SCMH1Q96GD3 660 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 COX4I2Q96KJ9 171 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 C1orf198Q9H425 327 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 G6PC2Q9NQR9 355 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 DNAJC13O75165 2243 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 CELSR3Q9NYQ7 3312 aa13.25□□□□□ -0.29
CCT4-201ENST00000394440 A6NL46 340 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 SLC19A2O60779 497 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 DCTDP32321 178 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 EIF1AXP47813 144 aaKnown RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 SELENOPP49908 381 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 MEOX1P50221 254 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 RIN1Q13671 783 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 PPP1R14AQ96A00 147 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 CPNE4Q96A23 557 aaPredicted RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 PPP1R3EQ9H7J1 279 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 SEC61A2Q9H9S3 476 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 GDF2Q9UK05 429 aaPredicted RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 RCE1Q9Y256 329 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 AK6Q9Y3D8 172 aaKnown RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 FAM166BA8MTA8 275 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 CLDN18P56856 261 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 TRIM16LQ309B1 348 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 CFAP77Q6ZQR2 320 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 RHOUQ7L0Q8 258 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 INTS12Q96CB8 462 aaKnown RBP13.24□□□□□ -0.29
CCT4-201ENST00000394440 SLC25A18Q9H1K4 315 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
CCT4-201ENST00000394440 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 KLRC4-KLRK1H3BQV0 150 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 OCMP0CE72 109 aaPredicted RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 ELK1P19419 428 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 AZGP1P25311 298 aaKnown RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 PTBP1P26599 531 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCT4-201ENST00000394440 NTF4P34130 210 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 SOX2P48431 317 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 MMP16P51512 607 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 BAK1Q16611 211 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 ZNF544Q6NX49 715 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 STAC2Q6ZMT1 411 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 C20orf196Q8IYI0 205 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 GDPD1Q8N9F7 314 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 OR6N1Q8NGY5 312 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 HTRA1Q92743 480 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 THRSPQ92748 146 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 TMEM106AQ96A25 262 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCT4-201ENST00000394440 C14orf119Q9NWQ9 140 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 ABRACLQ9P1F3 81 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 CYTIPO60759 359 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 PAHP00439 452 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 H2BFMP0C1H6 154 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 CD46P15529 392 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 ZNF708P17019 499 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 ODF4Q2M2E3 257 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 LRRTM1Q86UE6 522 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 SLC22A16Q86VW1 577 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 ROBO4Q8WZ75 1007 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 PNPLA2Q96AD5 504 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 NABP1Q96AH0 204 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 ZNF845Q96IR2 970 aaPredicted RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 SLC6A15Q9H2J7 730 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 PNRC2Q9NPJ4 139 aaKnown RBP13.23□□□□□ -0.29
CCT4-201ENST00000394440 CYSLTR2Q9NS75 346 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 EMC9Q9Y3B6 208 aa13.23□□□□□ -0.29
CCT4-201ENST00000394440 PDCD5O14737 125 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 DHHO43323 396 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 TMEM127O75204 238 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 ADRA2CP18825 462 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 LSM6P62312 80 aaKnown RBP13.22□□□□□ -0.29
CCT4-201ENST00000394440 CLN3Q13286 438 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 PDSS1Q5T2R2 415 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 CENPMQ9NSP4 180 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 TRAV8-7A0A075B6U6 113 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 ISG15P05161 165 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 EIF4EP06730 217 aaKnown RBP13.22□□□□□ -0.29
CCT4-201ENST00000394440 IL7P13232 177 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 PLGLB1Q02325 96 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 NELFAQ9H3P2 528 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 TIGARQ9NQ88 270 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 ASH2LQ9UBL3 628 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 OR52A1Q9UKL2 312 aa13.22□□□□□ -0.29
CCT4-201ENST00000394440 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms