RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TMEM106BQ9NUM4 274 aa14.77□□□□□ -0.05
SNRPA1-202ENST00000394082 GID8Q9NWU2 228 aa14.77□□□□□ -0.05
SNRPA1-202ENST00000394082 PURGQ9UJV8 347 aaKnown RBP14.77□□□□□ -0.05
SNRPA1-202ENST00000394082 AP3M1Q9Y2T2 418 aa14.77□□□□□ -0.05
SNRPA1-202ENST00000394082 A8MXK9 166 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 J3QW42 95 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 MRASO14807 208 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 ABHD16AO95870 558 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 ZFP36P26651 326 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 SCRN3Q0VDG4 424 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 FOXL1Q12952 345 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 OAFQ86UD1 273 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 LRRC28Q86X40 367 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 CLDN22Q8N7P3 220 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 OR2T12Q8NG77 320 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 GEMIN6Q8WXD5 167 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 GPA33Q99795 319 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 PATZ1Q9HBE1 687 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 MSL2Q9HCI7 577 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 UBAP1Q9NZ09 502 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 IL19Q9UHD0 177 aa14.76□□□□□ -0.05
SNRPA1-202ENST00000394082 IFNL4K9M1U5 179 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 SURF4O15260 269 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 TIMM8AO60220 97 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 PIP5K1CO60331 668 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 HKR1P10072 659 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 SLC6A9P48067 706 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 KLF10Q13118 480 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 TRAM2Q15035 370 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 LRRC23Q53EV4 343 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 PRR31Q5SQ13 230 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 RBMS3Q6XE24 437 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 TMPRSS11FQ6ZWK6 438 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 DOK3Q7L591 496 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 NRMQ8IXM6 262 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 HAVCR1Q96D42 359 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 ZNF747Q9BV97 191 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 TMEM120AQ9BXJ8 343 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 PLEK2Q9NYT0 353 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 NUP50Q9UKX7 468 aa14.75□□□□□ -0.05
SNRPA1-202ENST00000394082 A0A1W2PPL8 197 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ELOVL7A1L3X0 281 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 EFCAB9A8MZ26 197 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 F5H0A9 414 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 FSTL3O95633 263 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 IFNW1P05000 195 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 SBK2P0C263 348 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 PPIAL4GP0DN37 164 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ZNF12P17014 697 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 PRTN3P24158 256 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 BTG1P62324 171 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ZNF154Q13106 437 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 SPRNQ5BIV9 151 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 MICU2Q8IYU8 434 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 OR51A7Q8NH64 312 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ACOT11Q8WXI4 607 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 TPD52L3Q96J77 140 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 FNDC11Q9BVV2 318 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 SAR1AQ9NR31 198 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ATPIF1Q9UII2 106 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 INSIG2Q9Y5U4 225 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 AUP1Q9Y679 476 aa14.74□□□□□ -0.05
SNRPA1-202ENST00000394082 ARHGAP32A7KAX9 2087 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 TRAV27A0A087WT01 109 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 TEX13CA0A0J9YWL9 993 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 WIPF1O43516 503 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 SGCEO43556 437 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 SCG5P05408 212 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 CD14P08571 375 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 LSM6P62312 80 aaKnown RBP14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 AQP6Q13520 282 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 ARMCX4Q5H9R4 360 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 SHISA2Q6UWI4 295 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 MBOAT2Q6ZWT7 520 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 FAM122BQ7Z309 247 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 ARPINQ7Z6K5 226 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 IGFN1Q86VF2 1251 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 PTP4A1Q93096 173 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 SIGLEC11Q96RL6 698 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 NDEL1Q9GZM8 345 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 ANKRD19PQ9H560 264 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 ZNF696Q9H7X3 374 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 MMP26Q9NRE1 261 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 GRHPRQ9UBQ7 328 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 EGFL7Q9UHF1 273 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 PPP1R3CQ9UQK1 317 aa14.73□□□□□ -0.05
SNRPA1-202ENST00000394082 A0A087WUU8 490 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 PRSS37A4D1T9 235 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 TRAPPC2LH3BP13 241 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 CLDN34H7C241 214 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 XKRYO14609 159 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 FFAR1O14842 300 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 SLC22A2O15244 555 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 DOK2O60496 412 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 TROVE2P10155 538 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 RAC2P15153 192 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 MDH2P40926 338 aaKnown RBP14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 HTR5AP47898 357 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 SLC27A4Q6P1M0 643 aa14.72□□□□□ -0.05
SNRPA1-202ENST00000394082 Q6ZR03 302 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms