RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SMKR1H3BMG3 65 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 RAD51CO43502 376 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 ANGPTL7O43827 346 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 RDH16O75452 317 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 LSM8O95777 96 aaKnown RBP3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 POLR2MP0CAP2 368 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 ARG2P78540 354 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 MECOMQ03112 1051 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 RSPO1Q2MKA7 263 aaPredicted RBP3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 TTC19Q6DKK2 380 aaPredicted RBP3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGFL2Q6UWQ7 119 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 MRPL55Q7Z7F7 128 aaKnown RBP3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 Q8N9L7 120 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 APH1BQ8WW43 257 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 TM4SF18Q96CE8 201 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 SEH1LQ96EE3 360 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 LZTS2Q9BRK4 669 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC17A9Q9BYT1 436 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 NOX3Q9HBY0 568 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 TMEM9BQ9NQ34 198 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 CTSFQ9UBX1 484 aa3.54□□□□□ -1.84
RNU6-40P-201ENST00000384254 IGLV3-16A0A075B6K0 115 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 KCNE1BA0A087WTH5 132 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 H0YC42 278 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 AIREO43918 545 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR1E1P30953 314 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 TNFSF9P41273 254 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC1A2P43004 574 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 RPS5P46782 204 aaKnown RBP3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 CSNK1A1P48729 337 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 ILKQ13418 452 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 ZNF726P1Q15940 193 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 TPTE2P1Q5T6R2 138 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 PLCXD3Q63HM9 321 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 STUMQ69YW2 141 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 OR52W1Q6IF63 320 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 PEX13Q92968 403 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 WFIKKN1Q96NZ8 548 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC7A5P2Q9GIP4 190 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 TPK1Q9H3S4 243 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 PIGUQ9H490 435 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 BEX1Q9HBH7 125 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 SLC40A1Q9NP59 571 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 PXMP2Q9NR77 195 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 AGPAT4Q9NRZ5 378 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 RBAKQ9NYW8 714 aaPredicted RBP3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 WDR62O43379 1518 aa3.53□□□□□ -1.84
RNU6-40P-201ENST00000384254 PIKFYVEQ9Y2I7 2098 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 IGLV4-69A0A075B6H9 119 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 A0A096LNJ9 63 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 H0YHG0 523 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 HLA-HP01893 362 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 HBE1P02100 147 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBCP0CG48 685 aaKnown RBP3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 RND2P52198 227 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 UCNP55089 124 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBE2NP61088 152 aaKnown RBP3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAP1AP62834 184 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBE2SQ16763 222 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 ARL9Q6T311 187 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 FAM92BQ6ZTR7 304 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 CBR4Q8N4T8 237 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 Q8N976 141 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 CHST4Q8NCG5 386 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 ABHD3Q8WU67 409 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 LRRC29Q8WV35 223 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 GALNT14Q96FL9 552 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 LINC00167Q96N53 147 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 PLA2G2FQ9BZM2 168 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 MRM3Q9HC36 420 aaKnown RBP3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 LYRM4Q9HD34 91 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 LHX9Q9NQ69 397 aa3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 MYEF2Q9P2K5 600 aaKnown RBP3.52□□□□□ -1.85
RNU6-40P-201ENST00000384254 ASTN1O14525 1302 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBN2Q6ZU65 1347 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 A0A1B0GTQ1 180 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR6C74A6NCV1 312 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 CLTAP09496 248 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 U2AF2P26368 475 aaKnown RBP eCLIP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZNF138P52744 262 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 RAD51Q06609 339 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 ITIH4Q14624 930 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 NCF4Q15080 339 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 RGNQ15493 299 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 METTL21CQ5VZV1 264 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 NCCRP1Q6ZVX7 275 aaPredicted RBP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 MBOAT2Q6ZWT7 520 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 ABHD12BQ7Z5M8 362 aaPredicted RBP3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 SNX31Q8N9S9 440 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 NOXO1Q8NFA2 376 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 OR51E1Q8TCB6 317 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 GPX8Q8TED1 209 aa3.51□□□□□ -1.85
RNU6-40P-201ENST00000384254 GLYATL2Q8WU03 294 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms