RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 DNAAF1Q8NEP3 725 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SLC25A43Q8WUT9 341 aaPredicted RBP19.24■□□□□ 0.67
TRIM54-202ENST00000380075 RASL10BQ96S79 203 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SLC22A13Q9Y226 551 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 PCNX3Q9H6A9 2034 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 CACNA1AO00555 2505 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SLC17A2O00624 439 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 TP53I11O14683 189 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 XRCC3O43542 346 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SRSF10O75494 262 aaKnown RBP19.24■□□□□ 0.67
TRIM54-202ENST00000380075 MT-ND4P03905 459 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 ISG15P05161 165 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 KLK3P07288 261 aaPredicted RBP19.24■□□□□ 0.67
TRIM54-202ENST00000380075 ADH6P28332 368 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 GABREP78334 506 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 TOMM20Q15388 145 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 ODF4Q2M2E3 257 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 OLFML2AQ68BL7 652 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 NDUFAF7Q7L592 441 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SERPINA12Q8IW75 414 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 OR2M3Q8NG83 312 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 GON7Q9BXV9 100 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 OR51J1Q9H342 316 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 HRASLSQ9HDD0 168 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 EMC7Q9NPA0 242 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 SLC39A1Q9NY26 324 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 GTF2A1LQ9UNN4 478 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 RCE1Q9Y256 329 aa19.24■□□□□ 0.67
TRIM54-202ENST00000380075 ANKRD20A5PA0PJZ0 165 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 B4E171 279 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 PRAF2O60831 178 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 GLSO94925 669 aaPredicted RBP19.23■□□□□ 0.67
TRIM54-202ENST00000380075 EIF1P41567 113 aaKnown RBP19.23■□□□□ 0.67
TRIM54-202ENST00000380075 TSPAN7P41732 249 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 MFGE8Q08431 387 aaPredicted RBP19.23■□□□□ 0.67
TRIM54-202ENST00000380075 PCOLCEQ15113 449 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 GSG1Q2KHT4 349 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 TMEM81Q6P7N7 255 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 ZNF704Q6ZNC4 412 aaPredicted RBP19.23■□□□□ 0.67
TRIM54-202ENST00000380075 FGD2Q7Z6J4 655 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 POC1BQ8TC44 478 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 ASB5Q8WWX0 329 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 HYLS1Q96M11 299 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 RBP7Q96R05 134 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 H3BML4 177 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 ACHEP22303 614 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 S100A1P23297 94 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 CCR6P51684 374 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 MYBPHQ13203 477 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 RAB11BQ15907 218 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 GLT8D1Q68CQ7 371 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 ANKRD16Q6P6B7 361 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 GLB1L2Q8IW92 636 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 FADS6Q8N9I5 356 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 ST7LQ8TDW4 575 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 PTGES2Q9H7Z7 377 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 DIABLOQ9NR28 239 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 HHLA2Q9UM44 414 aa19.23■□□□□ 0.67
TRIM54-202ENST00000380075 AKAP13Q12802 2813 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 MEGF11A6BM72 1044 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 EFNA2O43921 213 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 TNFSF15O95150 251 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 MPZL1O95297 269 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 RCVRNP35243 200 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 FCN2Q15485 313 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 EXT1Q16394 746 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 BTBD16Q32M84 506 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 TMEM225Q6GV28 225 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 UTS2BQ765I0 119 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 DCXRQ7Z4W1 244 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 RYDENQ9NUL5 291 aaKnown RBP19.22■□□□□ 0.67
TRIM54-202ENST00000380075 PTTG3PQ9NZH4 202 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 MSRB2Q9Y3D2 182 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 HRH3Q9Y5N1 445 aa19.22■□□□□ 0.67
TRIM54-202ENST00000380075 MED19A0JLT2 244 aaPredicted RBP19.21■□□□□ 0.67
TRIM54-202ENST00000380075 CD37P11049 281 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 PSMB1P20618 241 aaKnown RBP19.21■□□□□ 0.67
TRIM54-202ENST00000380075 DCTDP32321 178 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 FMODQ06828 376 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 ZNF239Q16600 458 aaKnown RBP19.21■□□□□ 0.67
TRIM54-202ENST00000380075 THEM4Q5T1C6 240 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 OTPQ5XKR4 325 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 NHLRC1Q6VVB1 395 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 UEVLDQ8IX04 471 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 OR4K17Q8NGC6 315 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 C20orf85Q9H1P6 137 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 MED29Q9NX70 200 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 B3GAT1Q9P2W7 334 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 LOC100289279A0A1B0GTE1 492 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 C9J4A7 227 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 PEX14O75381 377 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 IGFBP3P17936 291 aaPredicted RBP19.21■□□□□ 0.67
TRIM54-202ENST00000380075 BIDP55957 195 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 TMEM244Q5VVB8 128 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 FAM166AQ6J272 317 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 MTFR2Q6P444 385 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 OR10H5Q8NGA6 315 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 GRPEL2Q8TAA5 225 aa19.21■□□□□ 0.67
TRIM54-202ENST00000380075 RNF133Q8WVZ7 376 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms