RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NR4A1P22736 598 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 PEX2P28328 305 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 GSTT1P30711 240 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 APLNRP35414 380 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 TBC1D28Q2M2D7 210 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 AADACL4Q5VUY2 407 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 C20orf204Q6ZNR8 217 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 VASH1Q7L8A9 365 aaPredicted RBP16.21■□□□□ 0.19
SSU72-203ENST00000378725 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.21■□□□□ 0.19
SSU72-203ENST00000378725 OR6K6Q8NGW6 343 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 TRUB1Q8WWH5 349 aaKnown RBP16.21■□□□□ 0.19
SSU72-203ENST00000378725 FBXW5Q969U6 566 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 DHRS9Q9BPW9 319 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 WDR76Q9H967 626 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 POU2F3Q9UKI9 436 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 NDRG4Q9ULP0 352 aaKnown RBP16.21■□□□□ 0.19
SSU72-203ENST00000378725 EDARQ9UNE0 448 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 POLR1DQ9Y2S0 133 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 COMMD3-BMI1R4GMX3 469 aa16.21■□□□□ 0.19
SSU72-203ENST00000378725 M0R129 80 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 ZNF593O00488 134 aaPredicted RBP16.2■□□□□ 0.18
SSU72-203ENST00000378725 SYNGR3O43761 229 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 DANCRP0C864 163 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 CCL2P13500 99 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 ENTPD1P49961 510 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 ADAM8P78325 824 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 NKX6-1P78426 367 aaPredicted RBP16.2■□□□□ 0.18
SSU72-203ENST00000378725 SLC34A1Q06495 639 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 LRRC36Q1X8D7 754 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 NXNL2Q5VZ03 156 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 CORO6Q6QEF8 472 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 PAMR1Q6UXH9 720 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 TIGD4Q8IY51 512 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 GALNT4Q8N4A0 578 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 PAQR4Q8N4S7 273 aaPredicted RBP16.2■□□□□ 0.18
SSU72-203ENST00000378725 OR8J1Q8NGP2 316 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 OR2AJ1Q8NGZ0 328 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 SMAP2Q8WU79 429 aaPredicted RBP16.2■□□□□ 0.18
SSU72-203ENST00000378725 IGFBPL1Q8WX77 278 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 IL4I1Q96RQ9 567 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 TEAD3Q99594 435 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 PITX2Q99697 317 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 RNPEPL1Q9HAU8 725 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 FAM118AQ9NWS6 357 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 PLEK2Q9NYT0 353 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 ATPIF1Q9UII2 106 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 ST6GALNAC2Q9UJ37 374 aa16.2■□□□□ 0.18
SSU72-203ENST00000378725 GDF2Q9UK05 429 aaPredicted RBP16.2■□□□□ 0.18
SSU72-203ENST00000378725 CCDC182A6NF36 153 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 OR6C6A6NF89 314 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 SLC16A6O15403 523 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 DOK2O60496 412 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 TMCC2O75069 709 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 PSKH1P11801 424 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 PCSK6P29122 969 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 GDI2P50395 445 aaKnown RBP16.19■□□□□ 0.18
SSU72-203ENST00000378725 CDC42P60953 191 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 APOFQ13790 326 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 RAB35Q15286 201 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 KLHL12Q53G59 568 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 ELFN2Q5R3F8 820 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 ZNF544Q6NX49 715 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 LINC00346Q8IVM7 164 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 OR1F12Q8NHA8 337 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 NINJ1Q92982 152 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 ZMYND19Q96E35 227 aaPredicted RBP16.19■□□□□ 0.18
SSU72-203ENST00000378725 INTS14Q96SY0 518 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 ZNF442Q9H7R0 627 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 CDH20Q9HBT6 801 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 PNRC2Q9NPJ4 139 aaKnown RBP16.19■□□□□ 0.18
SSU72-203ENST00000378725 CA10Q9NS85 328 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 SMPD3Q9NY59 655 aaPredicted RBP16.19■□□□□ 0.18
SSU72-203ENST00000378725 SPEF1Q9Y4P9 236 aa16.19■□□□□ 0.18
SSU72-203ENST00000378725 C5orf49A4QMS7 147 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 H0YHG0 523 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 ICMTO60725 284 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 ATE1O95260 518 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 RAF1P04049 648 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 CD53P19397 219 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 APOBEC3AP31941 199 aaPredicted RBP16.18■□□□□ 0.18
SSU72-203ENST00000378725 RIPK1Q13546 671 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 SLC25A30Q5SVS4 291 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 KRT80Q6KB66 452 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 CFAP77Q6ZQR2 320 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 MEPCEQ7L2J0 689 aaKnown RBP16.18■□□□□ 0.18
SSU72-203ENST00000378725 BCDIN3DQ7Z5W3 292 aaKnown RBP16.18■□□□□ 0.18
SSU72-203ENST00000378725 UBE2FQ969M7 185 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 MAP6Q96JE9 813 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 COQ7Q99807 217 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 HDHD2Q9H0R4 259 aa16.18■□□□□ 0.18
SSU72-203ENST00000378725 H2AFY2Q9P0M6 372 aaPredicted RBP16.18■□□□□ 0.18
SSU72-203ENST00000378725 RAI1Q7Z5J4 1906 aaPredicted RBP16.17■□□□□ 0.18
SSU72-203ENST00000378725 LOC100130705A0A1B0GUX0 176 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 CD8AP01732 235 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 SOD3P08294 240 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 TTKP33981 857 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 THBS4P35443 961 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 GLRXP35754 106 aa16.17■□□□□ 0.18
SSU72-203ENST00000378725 RPS27P42677 84 aaKnown RBP16.17■□□□□ 0.18
SSU72-203ENST00000378725 HTR5AP47898 357 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms