RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 C1QTNF3Q9BXJ4 246 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 ZBP1Q9H171 429 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC25A32Q9H2D1 315 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF768Q9H5H4 540 aaKnown RBP10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 COA3Q9Y2R0 106 aaPredicted RBP10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 NUDT19A8MXV4 375 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 DCTN6O00399 190 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 GALR3O60755 368 aaPredicted RBP10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 UBE2MP61081 183 aaKnown RBP10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 CDH26Q8IXH8 852 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 EXD3Q8N9H8 876 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 RAB39BQ96DA2 213 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 LCORQ96JN0 433 aaPredicted RBP10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 SOX18P35713 384 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC16A11Q8NCK7 471 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 OR4A16Q8NH70 328 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 ONECUT2O95948 504 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 BCKDHBP21953 392 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 TLE1Q04724 770 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 TOR2AQ5JU69 321 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 TEAD3Q99594 435 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 TXN2Q99757 166 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 PTDSS2Q9BVG9 487 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 NINQ8N4C6 2090 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
PCDHA9-201ENST00000378122 A0A087WZY1 265 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM129A0AVI4 362 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 P2RX3P56373 397 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 MZT1Q08AG7 82 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 B3GALNT1O75752 331 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 GABRB1P18505 474 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 ABHD17CQ6PCB6 329 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 NAA40Q86UY6 237 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 C1orf87Q8N0U7 546 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 OR2G3Q8NGZ4 309 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 GSX2Q9BZM3 304 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 DUSP5Q16690 384 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 LINC00299Q6ZSB3 139 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 RHOUQ7L0Q8 258 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 OPALINQ96PE5 141 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 FZR1Q9UM11 496 aa10.96□□□□□ -0.65
PCDHA9-201ENST00000378122 PRAMEF4O60810 478 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 FABP5Q01469 135 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF266Q14584 549 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 DPPA2Q7Z7J5 298 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 ANGPTL5Q86XS5 388 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 MITD1Q8WV92 249 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 HDAC8Q9BY41 377 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC22A11Q9NSA0 550 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF629Q9UEG4 869 aaPredicted RBP10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 KPTNQ9Y664 436 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 ZAR1LA6NP61 321 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 DVL1O14640 695 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 PAX6P26367 422 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 DVL1P1P54792 670 aaPredicted RBP10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 ADAM5Q6NVV9 412 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 OR2L13Q8N349 312 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 RELL2Q8NC24 303 aaPredicted RBP10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 TSSK2Q96PF2 358 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 CDCA4Q9BXL8 241 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 CLEC5AQ9NY25 188 aa10.96□□□□□ -0.66
PCDHA9-201ENST00000378122 hCG_1809904A0A1W2PP81 198 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PPE2 198 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PR64 198 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 KIR2DL3P43628 341 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC35A1P78382 337 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC10A1Q14973 349 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 TMEM104Q8NE00 496 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC35A4Q96G79 324 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 WSB2Q9NYS7 404 aaPredicted RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 YBX2Q9Y2T7 364 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 WNT11O96014 354 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NPBWR1P48145 328 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 CARD18P57730 90 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 UBE2IP63279 158 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 HBG1P69891 147 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 HBG2P69892 147 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 IL10RAQ13651 578 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NKAIN3Q8N8D7 197 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 CCDC74BQ96LY2 380 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF75AQ96N20 296 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 TECTBQ96PL2 329 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 C12orf57Q99622 126 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 PLK3Q9H4B4 646 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 FITM1A5D6W6 292 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 COX6B1P14854 86 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NECAP1Q8NC96 275 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 RHNO1Q9BSD3 238 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ABHD6Q9BV23 337 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SEMA6CQ9H3T2 930 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NRAPQ86VF7 1730 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ACHEP22303 614 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 TEKQ02763 1124 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ARHGAP11BQ3KRB8 267 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 TRMT12Q53H54 448 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 AAED1Q7RTV5 226 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NAXDQ8IW45 347 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 NANPQ8TBE9 248 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms