RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SERPINA2P20848 420 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 GIPRP48546 466 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 HMGN3Q15651 99 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 TMUB2Q71RG4 321 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 CAMKMTQ7Z624 323 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 SLC30A7Q8NEW0 376 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 FAM213BQ8TBF2 198 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 TSLPQ969D9 159 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 MIB2Q96AX9 1013 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF707Q96C28 371 aaPredicted RBP9.87□□□□□ -0.83
HIF3A-205ENST00000377670 LYSMD1Q96S90 227 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 SEC22CQ9BRL7 303 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 KATNB1Q9BVA0 655 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 GPR87Q9BY21 358 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 RNF167Q9H6Y7 350 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 UFSP2Q9NUQ7 469 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 PURGQ9UJV8 347 aaKnown RBP9.87□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF281Q9Y2X9 895 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 PLXNB2O15031 1838 aa9.87□□□□□ -0.83
HIF3A-205ENST00000377670 GPR176Q14439 515 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF718Q3SXZ3 478 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 DMBX1Q8NFW5 382 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SCARB1Q8WTV0 552 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 RAB1BQ9H0U4 201 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 IKZF5Q9H5V7 419 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 CDHR4A6H8M9 788 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SOCS6O14544 535 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SPINT2O43291 252 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SLC35D2Q76EJ3 337 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 FAM122BQ7Z309 247 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 CCDC71Q8IV32 467 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SLC35F3Q8IY50 421 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SLC16A11Q8NCK7 471 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 ST8SIA4Q92187 359 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 HRASLS5Q96KN8 279 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 FOCADQ5VW36 1801 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 C5orf67F2Z3F1 127 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SCO1O75880 301 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SNCAP37840 140 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 CLN3Q13286 438 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 XKR7Q5GH72 579 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 RGS7BPQ6MZT1 257 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 JMJD6Q6NYC1 403 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 ABHD17CQ6PCB6 329 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 NPSR1Q6W5P4 371 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SLC51BQ86UW2 128 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 TMEM171Q8WVE6 324 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 FAM212BQ9NTI7 297 aaPredicted RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 FXNQ16595 210 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF385BQ569K4 471 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 RPL22L1Q6P5R6 122 aaKnown RBP9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SPNS3Q6ZMD2 512 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 GRINAQ7Z429 371 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 BHLHE23Q8NDY6 225 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 OR6F1Q8NGZ6 308 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 HSD17B8Q92506 261 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 MARC2Q969Z3 335 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 C14orf79Q96F83 325 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 C20orf24Q9BUV8 137 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 FAM234AQ9H0X4 552 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 SMCO4Q9NRQ5 59 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF831Q5JPB2 1677 aa9.86□□□□□ -0.83
HIF3A-205ENST00000377670 CBR3O75828 277 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 CD3EP07766 207 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 GABRA1P14867 456 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 MTNR1BP49286 362 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 MTCP1P56278 107 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 FBXW12Q6X9E4 464 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 CT55Q8WUE5 264 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 CLEC2DQ9UHP7 191 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 HHLA2Q9UM44 414 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 SPAG17Q6Q759 2223 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 GALR2O43603 387 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 TMPRSS11DO60235 418 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 C1QBP02746 253 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 OMGP23515 440 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 TRHRP34981 398 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 RPS19P39019 145 aaKnown RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 MRPS34P82930 218 aaKnown RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 CATR1Q13166 79 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 SELENBP1Q13228 472 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 DLEU7Q6UYE1 221 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 OR52I1Q8NGK6 324 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 ZFAND1Q8TCF1 268 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 ASB17Q8WXJ9 295 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 DVL3Q92997 716 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 SORCS2Q96PQ0 1159 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 NKX3-1Q99801 234 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 NIPSNAP1Q9BPW8 284 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 PATZ1Q9HBE1 687 aaKnown RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 TNFRSF19Q9NS68 423 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 FAM186AA6NE01 2351 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 LRIT2A6NDA9 550 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 TUBAL3A6NHL2 446 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 OR7C1O76099 320 aaPredicted RBP9.85□□□□□ -0.83
HIF3A-205ENST00000377670 AKR7A3O95154 331 aa9.85□□□□□ -0.83
HIF3A-205ENST00000377670 UBL3O95164 117 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms