RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TLX2O43763 284 aaPredicted RBP18.98■□□□□ 0.63
SRM-201ENST00000376957 ABHD16AO95870 558 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 HLA-DQA2P01906 255 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 LIPAP38571 399 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 ALDH3B1P43353 468 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 HTR5AP47898 357 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 COX10Q12887 443 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 KCNMB1Q16558 191 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 PCGF3Q3KNV8 242 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 CLEC12AQ5QGZ9 265 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 ZNF786Q8N393 782 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 OR52E2Q8NGJ4 325 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 IPCEF1Q8WWN9 437 aaPredicted RBP18.98■□□□□ 0.63
SRM-201ENST00000376957 FOXN4Q96NZ1 517 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 RACGAP1Q9H0H5 632 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 TPK1Q9H3S4 243 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 EGLN3Q9H6Z9 239 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 RPRD1BQ9NQG5 326 aaKnown RBP18.98■□□□□ 0.63
SRM-201ENST00000376957 ASH2LQ9UBL3 628 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 B9D1Q9UPM9 204 aa18.98■□□□□ 0.63
SRM-201ENST00000376957 IGLV3-9A0A075B6K5 115 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 LOC100509620A0A075B734 347 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 NR4A2P43354 598 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.97■□□□□ 0.63
SRM-201ENST00000376957 ZMAT1Q5H9K5 638 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 LRP11Q86VZ4 500 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 ZCCHC24Q8N2G6 241 aaKnown RBP18.97■□□□□ 0.63
SRM-201ENST00000376957 NPEPL1Q8NDH3 523 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 OR10G2Q8NGC3 310 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 OR2AJ1Q8NGZ0 328 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 ABHD4Q8TB40 342 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 GIPC3Q8TF64 312 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 DGCR6LQ9BY27 220 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 ZNF556Q9HAH1 456 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 HINT3Q9NQE9 182 aaKnown RBP18.97■□□□□ 0.63
SRM-201ENST00000376957 CYSLTR2Q9NS75 346 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 CGGBP1Q9UFW8 167 aaPredicted RBP18.97■□□□□ 0.63
SRM-201ENST00000376957 ATPIF1Q9UII2 106 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 ZNF469Q96JG9 3925 aaPredicted RBP18.97■□□□□ 0.63
SRM-201ENST00000376957 MTORP42345 2549 aa18.97■□□□□ 0.63
SRM-201ENST00000376957 ICMTO60725 284 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 E2F6O75461 281 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 PPP1CBP62140 327 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 BNIP1Q12981 228 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 GGTLC2Q14390 218 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 SLC35F1Q5T1Q4 408 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 ZNF770Q6IQ21 691 aaPredicted RBP18.96■□□□□ 0.63
SRM-201ENST00000376957 UGT2A3Q6UWM9 527 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 ADGRG5Q8IZF4 528 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 OR2T33Q8NG76 320 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 OR2T4Q8NH00 348 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 CANT1Q8WVQ1 401 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 SLC7A6OSQ96CW6 309 aaPredicted RBP18.96■□□□□ 0.63
SRM-201ENST00000376957 DCLRE1CQ96SD1 692 aaKnown RBP18.96■□□□□ 0.63
SRM-201ENST00000376957 MMADHCQ9H3L0 296 aaPredicted RBP18.96■□□□□ 0.63
SRM-201ENST00000376957 TBCCD1Q9NVR7 557 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 KLHL21Q9UJP4 597 aa18.96■□□□□ 0.63
SRM-201ENST00000376957 ARRDC5A6NEK1 342 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 OR6C6A6NF89 314 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 TPD52L2O43399 206 aaKnown RBP18.95■□□□□ 0.62
SRM-201ENST00000376957 CD5LO43866 347 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 IFNGP01579 166 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 IGHV3-13P01766 116 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 SCG5P05408 212 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 NAT2P11245 290 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 RGS6P49758 472 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 TEKQ02763 1124 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 PPP1R8Q12972 351 aaKnown RBP18.95■□□□□ 0.62
SRM-201ENST00000376957 MAD2L1BPQ15013 274 aaPredicted RBP18.95■□□□□ 0.62
SRM-201ENST00000376957 MBNL2Q5VZF2 373 aaKnown RBP18.95■□□□□ 0.62
SRM-201ENST00000376957 VASH1Q7L8A9 365 aaPredicted RBP18.95■□□□□ 0.62
SRM-201ENST00000376957 ZBTB46Q86UZ6 589 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 ZNF101Q8IZC7 436 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 OR6V1Q8N148 313 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 SDR9C7Q8NEX9 313 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 OR5L1Q8NGL2 311 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 OR1F12Q8NHA8 337 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 TEX47Q8TBZ9 253 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 TSSK2Q96PF2 358 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 TSSK6Q9BXA6 273 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 HDHD2Q9H0R4 259 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 DECR2Q9NUI1 292 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 KCNG2Q9UJ96 466 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 POMPQ9Y244 141 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 GRIP1Q9Y3R0 1128 aa18.95■□□□□ 0.62
SRM-201ENST00000376957 C17orf100A8MU93 164 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 J3QW42 95 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 GSC2O15499 205 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 MPZL1O95297 269 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 CLPTM1O96005 669 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 ZNF823P16415 610 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 GIFP27352 417 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 GZMKP49863 264 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 ERVS71-1P61550 626 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 MRPS11P82912 194 aaKnown RBP18.94■□□□□ 0.62
SRM-201ENST00000376957 MSMPQ1L6U9 139 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 TMEM249Q2WGJ8 235 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 FAM209AQ5JX71 171 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 CYB5R2Q6BCY4 276 aa18.94■□□□□ 0.62
SRM-201ENST00000376957 CD300LDQ6UXZ3 194 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms