RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SYT9Q86SS6 491 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 C7orf34Q96L11 122 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 NDEL1Q9GZM8 345 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 FAM107BQ9H098 131 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 POLE4Q9NR33 117 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 EGFL7Q9UHF1 273 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 SAMD4AQ9UPU9 718 aaKnown RBP17.87■□□□□ 0.45
VSX1-201ENST00000376707 ADAM18Q9Y3Q7 739 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 A0A0G2JMP0 313 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 A0A0X1KG70 313 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 PLPP2O43688 288 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 AHCYL1O43865 530 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 DEAF1O75398 565 aaPredicted RBP17.86■□□□□ 0.45
VSX1-201ENST00000376707 VENTXO95231 258 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 IGHV2-5P01817 119 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 H1F0P07305 194 aaKnown RBP17.86■□□□□ 0.45
VSX1-201ENST00000376707 CD14P08571 375 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 RHCEP18577 417 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 SLC3A1Q07837 685 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 CPLX4Q7Z7G2 160 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.86■□□□□ 0.45
VSX1-201ENST00000376707 OR4M2Q8NGB6 313 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 ZNF418Q8TF45 676 aaPredicted RBP17.86■□□□□ 0.45
VSX1-201ENST00000376707 DIRC2Q96SL1 478 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 GAL3ST1Q99999 423 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 WACQ9BTA9 647 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 GORASP2Q9H8Y8 452 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 EMC7Q9NPA0 242 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 G6PC2Q9NQR9 355 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 ZDHHC8Q9ULC8 765 aa17.86■□□□□ 0.45
VSX1-201ENST00000376707 FAM32AQ9Y421 112 aaKnown RBP17.86■□□□□ 0.45
VSX1-201ENST00000376707 ISPDA4D126 451 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 TIMM8AO60220 97 aaPredicted RBP17.85■□□□□ 0.45
VSX1-201ENST00000376707 PTP4A3O75365 173 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 ABHD16AO95870 558 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 SCG5P05408 212 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 ADH4P08319 380 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 LIMS1P48059 325 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 SCRN3Q0VDG4 424 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 FAM122BQ7Z309 247 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 ZER1Q7Z7L7 766 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 PEG10Q86TG7 708 aaKnown RBP17.85■□□□□ 0.45
VSX1-201ENST00000376707 FAM86B1Q8N7N1 296 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 DHRS1Q96LJ7 313 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 Q96M85 177 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 ZNF570Q96NI8 536 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 MSL2Q9HCI7 577 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 ADA2Q9NZK5 511 aa17.85■□□□□ 0.45
VSX1-201ENST00000376707 LOC105371242A0A075B767 164 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 DOK2O60496 412 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 RGS9O75916 674 aaPredicted RBP17.84■□□□□ 0.45
VSX1-201ENST00000376707 UBOX5O94941 541 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 COX5BP10606 129 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 HSD17B1P14061 328 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 GSTM3P21266 225 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 HTR5AP47898 357 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 MESTQ5EB52 335 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 MTX3Q5HYI7 312 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 ZNF771Q7L3S4 317 aaPredicted RBP17.84■□□□□ 0.45
VSX1-201ENST00000376707 RNF148Q8N7C7 305 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 NPEPL1Q8NDH3 523 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 SEMA6DQ8NFY4 1073 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 ZFAND2BQ8WV99 257 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 FAM46AQ96IP4 442 aaKnown RBP17.84■□□□□ 0.45
VSX1-201ENST00000376707 GPX7Q96SL4 187 aaPredicted RBP17.84■□□□□ 0.45
VSX1-201ENST00000376707 KLHL21Q9UJP4 597 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 SIGLEC7Q9Y286 467 aa17.84■□□□□ 0.45
VSX1-201ENST00000376707 PRSS37A4D1T9 235 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 SGCEO43556 437 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 GMNNO75496 209 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 CD55P08174 381 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 EPHA1P21709 976 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 OMPP47874 163 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 TNFAIP6P98066 277 aaPredicted RBP17.83■□□□□ 0.44
VSX1-201ENST00000376707 PSG7Q13046 419 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 DCAF12L2Q5VW00 463 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 C12orf54Q6X4T0 127 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 C1orf229Q6ZS94 237 aaPredicted RBP17.83■□□□□ 0.44
VSX1-201ENST00000376707 FUZQ9BT04 418 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 TMPRSS13Q9BYE2 586 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 TBCCD1Q9NVR7 557 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 ANK2Q01484 3957 aa17.83■□□□□ 0.44
VSX1-201ENST00000376707 TRBV4-1A0A0J9YWV2 114 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 J3QLI3 93 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 NDUFB2O95178 105 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 AVPP01185 164 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 SEMG1P04279 462 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 TUBG1P23258 451 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 SEC23BQ15437 767 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 FGD3Q5JSP0 725 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 GPR139Q6DWJ6 353 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 PIGWQ7Z7B1 504 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 PGAM4Q8N0Y7 254 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 RERGLQ9H628 205 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 NRIP3Q9NQ35 241 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 TUBG2Q9NRH3 451 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 CD300AQ9UGN4 299 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 MAGEL2Q9UJ55 1249 aa17.82■□□□□ 0.44
VSX1-201ENST00000376707 PCDHB10Q9UN67 800 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms