RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ACTR1AP61163 376 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CD226Q15762 336 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CBLN3Q6UW01 205 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 BAP18Q8IXM2 172 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 C12orf76Q8N812 135 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 OR9A4Q8NGU2 314 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 NANPQ8TBE9 248 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 PRMT8Q9NR22 394 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-201ENST00000376656 EDARQ9UNE0 448 aa14.86□□□□□ -0.03
TRIM39-201ENST00000376656 CACNA1IQ9P0X4 2223 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 GUSBP08236 651 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 IFI6P09912 130 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ABOP16442 354 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 C5AR1P21730 350 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 RAB38P57729 211 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 SPOCK1Q08629 439 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 RNASE10Q5GAN6 216 aaKnown RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 FDX2Q6P4F2 183 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 MDGA2Q7Z553 956 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ADGRE4PQ86SQ3 457 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 CSNK1A1LQ8N752 337 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 RRNAD1Q96FB5 475 aaKnown RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 SCARF2Q96GP6 870 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 G6PC3Q9BUM1 346 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ACKR4Q9NPB9 350 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ARHGEF17Q96PE2 2063 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 C5orf51A6NDU8 294 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 TTLL8A6PVC2 850 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 FARS2O95363 451 aaKnown RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 AKR1C4P17516 323 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 AIMP2Q13155 320 aaKnown RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 MST1LQ2TV78 715 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 PGAP1Q75T13 922 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF761Q86XN6 746 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 JAGN1Q8N5M9 183 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 SLC30A7Q8NEW0 376 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 OR10R2Q8NGX6 335 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 RNF141Q8WVD5 230 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 LIPHQ8WWY8 451 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 TSACCQ96A04 125 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 CMBLQ96DG6 245 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 ZC3H10Q96K80 434 aaKnown RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 KXD1Q9BQD3 176 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 SEC11CQ9BY50 192 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 CHMP1AQ9HD42 196 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-201ENST00000376656 CYTL1Q9NRR1 136 aa14.85□□□□□ -0.03
TRIM39-201ENST00000376656 KAT7O95251 611 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 IFNA4P05014 189 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 CRHP06850 196 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 ERCC1P07992 297 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 HNRNPA1P09651 372 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PSMB6P28072 239 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 TACR3P29371 465 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 NR0B1P51843 470 aaKnown RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 WBP2NLQ6ICG8 309 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 FJX1Q86VR8 437 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PRRT1Q99946 306 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 CREBZFQ9NS37 354 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 B9D1Q9UPM9 204 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 COL4A2P08572 1712 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 ARPC4-TTLL3A0A0A6YYG9 625 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 TEX13DA0A0J9YY54 714 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF705EA8MWA4 302 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PTGFRP43088 359 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 SQSTM1Q13501 440 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 RNF128Q8TEB7 428 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 THRSPQ92748 146 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 MMP26Q9NRE1 261 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 CKLFQ9UBR5 152 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 KIF26BQ2KJY2 2108 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PHYHO14832 338 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 LDLRAD4O15165 306 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 STK17BO94768 372 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 APBB3O95704 486 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PLGP00747 810 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 FAM157CP0CG43 387 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 PNMTP11086 282 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 IGFBP3P17936 291 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 SERPINF1P36955 418 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 MEF2DQ14814 521 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 SMAD2Q15796 467 aaKnown RBP14.84□□□□□ -0.03
TRIM39-201ENST00000376656 GFOD2Q3B7J2 385 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 EMC4Q5J8M3 183 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF679Q8IYX0 411 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 NUDT9Q9BW91 350 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 ZNF304Q9HCX3 659 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 SLC2A8Q9NY64 477 aa14.84□□□□□ -0.03
TRIM39-201ENST00000376656 HSPB2A8KAH6 182 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 H0Y8X5 98 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 K7EQS6 105 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ADH1BP00325 375 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 SPARCP09486 303 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 SNRPEP62304 92 aaKnown RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 EIF2B1Q14232 305 aaKnown RBP14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ERV3-1Q14264 604 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 HSPB2Q16082 182 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 TRAPPC6BQ86SZ2 158 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 LURAP1LQ8IV03 231 aa14.83□□□□□ -0.04
TRIM39-201ENST00000376656 ZNF587Q96SQ5 575 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms