RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 LINC00597Q9H2U6 94 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GSTO2Q9H4Y5 243 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 A0A1B0GTW7 788 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 CRXO43186 299 aaPredicted RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GPX3P22352 226 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 EXOSC7Q15024 291 aaKnown RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 VRK2Q86Y07 508 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 OR52N1Q8NH53 320 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 IGSF21Q96ID5 467 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 PARP12Q9H0J9 701 aaKnown RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 EDN3P14138 238 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 NPY1RP25929 384 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 PCBP4P57723 403 aaKnown RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 CBARPQ8N350 705 aaPredicted RBP10.71□□□□□ -0.7
VPS13A-205ENST00000376636 OR5A2Q8NGI9 324 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GPX8Q8TED1 209 aa10.71□□□□□ -0.7
VPS13A-205ENST00000376636 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 C1orf61Q13536 156 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR2G6Q5TZ20 316 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 GLIPR1L1Q6UWM5 242 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 A0A1B0GTQ1 180 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR5AL1P0C617 328 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 EN2P19622 333 aaPredicted RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR8G1Q15617 311 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 DOK3Q7L591 496 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 MEX3DQ86XN8 651 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ISG20Q96AZ6 181 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 DOK2O60496 412 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 GALR1P47211 349 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR5M10Q6IEU7 315 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 TUSC5Q8IXB3 177 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 DOK4Q8TEW6 326 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF256Q9Y2P7 627 aaPredicted RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF541Q9H0D2 1346 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 FCGR2CP31995 323 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 GPR75O95800 540 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 TCN2P20062 427 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 CPEB2Q7Z5Q1 589 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 EXTL1Q92935 676 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 A0A0A6YYJ9 748 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 SLC5A10A0PJK1 596 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 BCAT2O15382 392 aaPredicted RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 DEDDO75618 318 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 RAD52P43351 418 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 SNRPGP62308 76 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 REC114Q7Z4M0 266 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM178AQ8NBL3 297 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 MED20Q9H944 212 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 TDRD6O60522 2096 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 A0A1B0GVG6 124 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 H3BVH4 76 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR3A1P47881 315 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 OR8B4Q96RC9 309 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 KCNK15Q9H427 330 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF840PA6NDX5 716 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 C1orf105O95561 183 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 CD37P11049 281 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 LSRQ86X29 649 aaPredicted RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ANGPTL5Q86XS5 388 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 P4HTMQ9NXG6 502 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ZP3P21754 424 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 KCNJ3P48549 501 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 GNG4P50150 75 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 LCN15Q6UWW0 184 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 TAAR6Q96RI8 345 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 ELF4Q99607 663 aaPredicted RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
VPS13A-205ENST00000376636 NDRG4Q9ULP0 352 aaKnown RBP10.7□□□□□ -0.7
VPS13A-205ENST00000376636 UNC13CQ8NB66 2214 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 RGPD1P0DJD0 1748 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 MON2Q7Z3U7 1717 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 PMS2P11Q13670 270 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 OR52I1Q8NGK6 324 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 CA14Q9ULX7 337 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF835Q9Y2P0 537 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 NUP98P52948 1817 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 MFSD9Q8NBP5 474 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 NPAS1Q99742 590 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 CHST11Q9NPF2 352 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 GPR173Q9NS66 373 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 LY86O95711 162 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 CPEP16870 476 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZNF542PQ5EBM4 170 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 EDARADDQ8WWZ3 215 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 RBP2P50120 134 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 ZP2Q05996 745 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 SCGB1D4Q6XE38 83 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 OR5D13Q8NGL4 314 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 PCNPQ8WW12 178 aaKnown RBP10.69□□□□□ -0.7
VPS13A-205ENST00000376636 OCEL1Q9H607 264 aa10.69□□□□□ -0.7
VPS13A-205ENST00000376636 LMAN1LQ9HAT1 526 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms