RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 OTOSQ8NHW6 89 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 AKIRIN1Q9H9L7 192 aaPredicted RBP12.55□□□□□ -0.4
MSH5-202ENST00000375740 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 OCIAD1Q9NX40 245 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 EXPH5Q8NEV8 1989 aa12.55□□□□□ -0.4
MSH5-202ENST00000375740 ADAMTS9Q9P2N4 1935 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 OR6C65A6NJZ3 312 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 SPDEFO95238 335 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 TGM6O95932 706 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 HLA-DOBP13765 273 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 HOXA1P49639 335 aaPredicted RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 PITPNAQ00169 270 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 PPP1R3BQ86XI6 285 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 CMTM4Q8IZR5 234 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 BOLLQ8N9W6 283 aaKnown RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 ACTR6Q9GZN1 396 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 CAMK2AQ9UQM7 478 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 V9GY05 133 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 TNRC6BQ9UPQ9 1833 aaKnown RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 OR2M5A3KFT3 312 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 OR4C45A6NMZ5 311 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 F8W036 122 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 RP2O75695 350 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 RLN2P04090 185 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 CFIP05156 583 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 PSMB1P20618 241 aaKnown RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 ODF4Q2M2E3 257 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 FAM74A1Q5RGS3 127 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 PHF19Q5T6S3 580 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 ZNF660Q6AZW8 331 aaPredicted RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 EDAQ92838 391 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 ARL5BQ96KC2 179 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 GUCD1Q96NT3 240 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 SPSB2Q99619 263 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 TCF7L1Q9HCS4 588 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
MSH5-202ENST00000375740 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 VDAC3Q9Y277 283 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 PCDHGA5Q9Y5G8 931 aa12.54□□□□□ -0.4
MSH5-202ENST00000375740 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 TRBV5-5A0A0J9YX44 114 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 H3BSH0 61 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 CTLA4P16410 223 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 DPP4P27487 766 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 CLDN12P56749 244 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
MSH5-202ENST00000375740 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 UBE2NLQ5JXB2 153 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 C5orf46Q6UWT4 87 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 SLC35D2Q76EJ3 337 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 ZNF676Q8N7Q3 588 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 OR10AC1Q8NH08 325 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 WNT2BQ93097 391 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 ULBP3Q9BZM4 244 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 MRPL22Q9NWU5 206 aaKnown RBP12.53□□□□□ -0.4
MSH5-202ENST00000375740 FXYD6-FXYD2A0A087WZ82 144 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 PHYHO14832 338 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 GDF9O60383 454 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 ONECUT2O95948 504 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 HPP00738 406 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 MEP1BQ16820 701 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 FAM69BQ5VUD6 431 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
MSH5-202ENST00000375740 LRRN1Q6UXK5 716 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 FCRLAQ7L513 359 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 SERPINA12Q8IW75 414 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 OR5L2Q8NGL0 311 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 SLC25A28Q96A46 364 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 FXYD6Q9H0Q3 95 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
MSH5-202ENST00000375740 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
MSH5-202ENST00000375740 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 PRSS44E7EML9 344 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 IGHMP01871 453 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 SPARCP09486 303 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 ADRA2CP18825 462 aa12.52□□□□□ -0.41
MSH5-202ENST00000375740 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms