RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ADAM8P78325 824 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 RSU1Q15404 277 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 GXYLT1Q4G148 440 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 RPL7L1Q6DKI1 246 aaKnown RBP18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 FAM220AQ7Z4H9 259 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF676Q8N7Q3 588 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF296Q8WUU4 475 aaPredicted RBP18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 PRDM7Q9NQW5 492 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 SAGE1Q9NXZ1 904 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 DOK5Q9P104 306 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 TBX21Q9UL17 535 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 NUP210LQ5VU65 1888 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 A0A1W2PPV9 198 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 C4orf47A7E2U8 309 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 C1QTNF3-AMACRE9PGA6 284 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 EIF1AYO14602 144 aaKnown RBP18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 CLEC3AO75596 197 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 EIF1AXP47813 144 aaKnown RBP18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 Q6ZRG5 221 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 GKN2Q86XP6 184 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 DTD2Q96FN9 168 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 ADAD1Q96M93 576 aaKnown RBP18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 C2orf88Q9BSF0 95 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 OR52A5Q9H2C5 316 aa18.56■□□□□ 0.56
TMEFF1-201ENST00000374879 RPL4P36578 427 aaKnown RBP18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 RPS10P46783 165 aaKnown RBP18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 PAPD4Q6PIY7 484 aaKnown RBP18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 FAM174AQ8TBP5 190 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 RASD2Q96D21 266 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 PTCHD1Q96NR3 888 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 SOX7Q9BT81 388 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 NMES1Q9C002 83 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 TAF9BQ9HBM6 251 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 RXFP3Q9NSD7 469 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 FLRT3Q9NZU0 649 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 ZDHHC8Q9ULC8 765 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 OR4C45A6NMZ5 311 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 EFSO43281 561 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 NDUFB2O95178 105 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 COX5BP10606 129 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 NID1P14543 1247 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 SULT1A2P50226 295 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 PKIAP61925 76 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 AWAT2Q6E213 333 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 NRSN1Q8IZ57 195 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 PARP12Q9H0J9 701 aaKnown RBP18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 POMT1Q9Y6A1 747 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF780BQ9Y6R6 833 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3BA6NDS4 549 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3FA6NER0 549 aaPredicted RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 PLAURQ03405 335 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 EBPQ15125 230 aaKnown RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 LINC01590Q5TEZ4 76 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3GQ6DHY5 549 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF595Q8IYB9 648 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 PLPP7Q8NBV4 271 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 OR5T3Q8NGG3 340 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF563Q8TA94 476 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 MS4A6EQ96DS6 147 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TSSK2Q96PF2 358 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 PARP11Q9NR21 331 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 SLC2A4RGQ9NR83 387 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TMEM184BQ9Y519 407 aaPredicted RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 IGKV1-8A0A0C4DH67 115 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 FITM1A5D6W6 292 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 PLGP00747 810 aaPredicted RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 RAB6AP20340 208 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 VASPP50552 380 aaPredicted RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 ZNF77Q15935 545 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 OR2A2Q6IF42 318 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 HEPN1Q6WQI6 88 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TTLL10Q6ZVT0 673 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 KDF1Q8NAX2 398 aaPredicted RBP18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 MAFIPQ8WZ33 124 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 OR8D1Q8WZ84 308 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 MCHR2Q969V1 340 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 PRRT1Q99946 306 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 ALG12Q9BV10 488 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 SUCNR1Q9BXA5 334 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 SLC5A7Q9GZV3 580 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 SMOC1Q9H4F8 434 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 LMAN1LQ9HAT1 526 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 AMDHD2Q9Y303 409 aa18.54■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3DA0A087WVF3 549 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3IA0A087WXS9 549 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 ELOA3DA6NLF2 546 aaPredicted RBP18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 TBC1D3LB9A6J9 549 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 SLC17A2O00624 439 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 FKTNO75072 461 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 DUS4LO95620 317 aaKnown RBP18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 DBIP07108 87 aaKnown RBP18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 TACR3P29371 465 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 LSSP48449 732 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 ELOA3BQ3SY89 546 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 MOGAT2Q3SYC2 334 aa18.53■□□□□ 0.56
TMEFF1-201ENST00000374879 SLC35D3Q5M8T2 416 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms