RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MAT1AQ00266 395 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 LTC4SQ16873 150 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 PRSS36Q5K4E3 855 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 OR13C8Q8NGS7 320 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 RASD2Q96D21 266 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 KIRREL1Q96J84 757 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CEP290O15078 2479 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 NSG1A0A0A6YYJ2 146 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 H0Y8X5 98 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 GLSO94925 669 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 THBS1P07996 1170 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CISD3P0C7P0 127 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 ACKR3P25106 362 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 PHLDA2Q53GA4 152 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 DPPA2Q7Z7J5 298 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CDH26Q8IXH8 852 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 FAM26EQ8N5C1 309 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 DUS3LQ96G46 650 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 LCORQ96JN0 433 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 TEAD3Q99594 435 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 TEX101Q9BY14 249 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CSAG2Q9Y5P2 127 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 LGALS8O00214 317 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 SBK2P0C263 348 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A6P0DMU7 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A5P0DMU8 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A7P0DMV0 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A8P0DMV1 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A9P0DMV2 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A2Q5DJT8 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 ACOT7LQ6ZUV0 252 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 MED25Q71SY5 747 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 NAXDQ8IW45 347 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 OR6K3Q8NGY3 331 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 B3GALT5Q9Y2C3 310 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 PRKRAO75569 313 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 SULT1C4O75897 302 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 JTBO76095 146 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 PRPH2P23942 346 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 FABP6P51161 128 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 MAP2K6P52564 334 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 TAF9Q16594 264 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 SAXO2Q658L1 398 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 ANGPTL5Q86XS5 388 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 CNEP1R1Q8N9A8 125 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 VCANP13611 3396 aa11.23□□□□□ -0.61
NPLOC4-202ENST00000374747 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 H7C1Q1 480 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 CHRNB4P30926 498 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PPP2CBP62714 309 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PPP2CAP67775 309 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 DGCR2P98153 550 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 C17orf67Q0P5P2 114 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SEH1LQ96EE3 360 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 DUSP21Q9H596 190 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 ACER3Q9NUN7 267 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF724A8MTY0 619 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SCRG1O75711 98 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 S100A8P05109 93 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SLC35E2P0CK97 266 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 GABRB1P18505 474 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM71Q6P5X7 295 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 RHOUQ7L0Q8 258 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SPEM1Q8N4L4 309 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SBF1O95248 1867 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 OR5M8Q8NGP6 311 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 APH1BQ8WW43 257 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 ELF4Q99607 663 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PCDHB10Q9UN67 800 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 FITM1A5D6W6 292 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PLPP1O14494 284 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 ACHEP22303 614 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 SOWAHCQ53LP3 525 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 ZNF425Q6IV72 752 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 DCXRQ7Z4W1 244 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PRR14Q9BWN1 585 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 MMACHCQ9Y4U1 282 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 USP34Q70CQ2 3546 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 A0A1W2PPC4 97 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 POU3F3P20264 500 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 GRB2P62993 217 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 NUMA1Q14980 2115 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 TRIM61Q5EBN2 209 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 C17orf107Q6ZR85 190 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 PIGTQ969N2 578 aa11.22□□□□□ -0.61
NPLOC4-202ENST00000374747 MRGPRX3Q96LB0 322 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms