RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
USP48-203ENST00000374732 TCF24Q7RTU0 167 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 MDGA2Q7Z553 956 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 OR8I2Q8N0Y5 310 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 OR1N2Q8NGR9 330 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 SPRYD4Q8WW59 207 aaPredicted RBP7.13□□□□□ -1.27
USP48-203ENST00000374732 PTX4Q96A99 478 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 EPYCQ99645 322 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 NKX3-1Q99801 234 aaPredicted RBP7.13□□□□□ -1.27
USP48-203ENST00000374732 MICU1Q9BPX6 476 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 AMBNQ9NP70 447 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 HSPB7Q9UBY9 170 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 CITO14578 2027 aa7.13□□□□□ -1.27
USP48-203ENST00000374732 FAM90A8PA6NJQ4 464 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR7C2O60412 319 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 AMBPP02760 352 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 WNT2P09544 360 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 UCHL1P09936 223 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 FAM90A13PP0C7W8 464 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 FAM90A24PP0C7X0 464 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 CXCL8P10145 99 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 MST1P26927 711 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 HTR2CP28335 458 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 SLC6A8P48029 635 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 NPBWR1P48145 328 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 TCL1AP56279 114 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 DCDP81605 110 aaKnown RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 GPR18Q14330 331 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 VAMP3Q15836 100 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 DCAF4L1Q3SXM0 396 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 XYLT1Q86Y38 959 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR4E2Q8NGC2 313 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR13C4Q8NGS5 318 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 PRR11Q96HE9 360 aaPredicted RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 C16orf70Q9BSU1 422 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 LPAR5Q9H1C0 372 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 SSU72Q9NP77 194 aaKnown RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 CBLCQ9ULV8 474 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 COL4A6Q14031 1691 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 MCM3APO60318 1980 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 A0A1W2PQM1 296 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 A0A1W2PR77 199 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR6C6A6NF89 314 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR2W5A6NFC9 320 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 FFAR3O14843 346 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 GPR42O15529 346 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 C8AP07357 584 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 NMBP08949 121 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 EN2P19622 333 aaPredicted RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 PLP1P60201 277 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 AIMP2Q13155 320 aaKnown RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 PNCKQ6P2M8 343 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 Q7L0L9 218 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 SLC35E3Q7Z769 313 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 LILRA2Q8N149 483 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 TMEM217Q8N7C4 229 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 BEST4Q8NFU0 473 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 PTPMT1Q8WUK0 201 aaPredicted RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 SMARCD1Q96GM5 515 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 ADI1Q9BV57 179 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 ASF1BQ9NVP2 202 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 BEX4Q9NWD9 120 aaPredicted RBP7.12□□□□□ -1.27
USP48-203ENST00000374732 SLC45A2Q9UMX9 530 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 SLC17A4Q9Y2C5 497 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 MEMO1Q9Y316 297 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 RNF115Q9Y4L5 304 aa7.12□□□□□ -1.27
USP48-203ENST00000374732 LOC100130705A0A1B0GUX0 176 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 COLCA2A8K830 154 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 SCGNO76038 276 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 SFTPBP07988 381 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 RHOCP08134 193 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ANKRD34CP0C6C1 535 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 CD37P11049 281 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TMEM132DQ14C87 1099 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 LTC4SQ16873 150 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 HJURPQ8NCD3 748 aaPredicted RBP7.11□□□□□ -1.27
USP48-203ENST00000374732 OR7A2PQ8NGA2 310 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 RCN3Q96D15 328 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 P2RY11Q96G91 374 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 HCAR1Q9BXC0 346 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 GSTO2Q9H4Y5 243 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 FOXJ3Q9UPW0 622 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ZCWPW2A0A1B0GU75 182 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 C21orf140B9A014 251 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 NBR2O15453 112 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 ATP6AP2O75787 350 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 NR2F6P10588 404 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 TDGF1P13385 188 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 MMP11P24347 488 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 KDELR1P24390 212 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 NTSR1P30989 418 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 CCKARP32238 428 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 CPOXP36551 454 aa7.11□□□□□ -1.27
USP48-203ENST00000374732 RRADP55042 308 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms