RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 WDR76Q9H967 626 aa13.03□□□□□ -0.32
HSPG2-201ENST00000374673 H2AFY2Q9P0M6 372 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-201ENST00000374673 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
HSPG2-201ENST00000374673 IGHV2OR16-5A0A0B4J2B6 119 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 SLC22A31A6NKX4 558 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 SGCEO43556 437 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 MPZL2O60487 215 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 TMCC2O75069 709 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 PLAUP00749 431 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 CRYAAP02489 173 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 GABRB1P18505 474 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 CALCRP30988 508 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 RPS7P62081 194 aaKnown RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 SNRPGP62308 76 aaKnown RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ADARB1P78563 741 aaKnown RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 GGTLC2Q14390 218 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 CCDC92Q53HC0 331 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ADAM5Q6NVV9 412 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF774Q6NX45 483 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 LINC00346Q8IVM7 164 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 CPEB3Q8NE35 698 aaKnown RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 SLC30A7Q8NEW0 376 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 KBTBD8Q8NFY9 601 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 KCNS3Q9BQ31 491 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ADI1Q9BV57 179 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 PLEK2Q9NYT0 353 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ATPIF1Q9UII2 106 aa13.02□□□□□ -0.33
HSPG2-201ENST00000374673 GDF2Q9UK05 429 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-201ENST00000374673 ATP6V1G2-DDX39BF2Z307 99 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 H0YAE9 185 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF593O00488 134 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 RER1O15258 196 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 SYNGR3O43761 229 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 DOK2O60496 412 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 PSKH1P11801 424 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF35P13682 527 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 STOMP27105 288 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 APLNRP35414 380 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 CDH11P55287 796 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 RAB35Q15286 201 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 OCLNQ16625 522 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 TBC1D28Q2M2D7 210 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 MEDAGQ5VYS4 303 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 SLC22A25Q6T423 547 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 ENTHD1Q8IYW4 607 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 OR6N2Q8NGY6 317 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 LILRB1Q8NHL6 650 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 POM121L2Q96KW2 1035 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-201ENST00000374673 APOL4Q9BPW4 351 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 HDHD2Q9H0R4 259 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 PLEKHF2Q9H8W4 249 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 HAO2Q9NYQ3 351 aa13.01□□□□□ -0.33
HSPG2-201ENST00000374673 CADP27708 2225 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 OR6C6A6NF89 314 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 SELENOFO60613 162 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 SPARCP09486 303 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 HTR1FP30939 366 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 CAPGP40121 348 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 RPS27P42677 84 aaKnown RBP13□□□□□ -0.33
HSPG2-201ENST00000374673 TMED1Q13445 227 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 IL18R1Q13478 541 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF672Q499Z4 452 aaPredicted RBP13□□□□□ -0.33
HSPG2-201ENST00000374673 ELFN2Q5R3F8 820 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF691Q5VV52 312 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 B3GLCTQ6Y288 498 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 CFAP77Q6ZQR2 320 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 SHFQ7M4L6 423 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 RHOXF1Q8NHV9 184 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 CYGBQ8WWM9 190 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 RFKQ969G6 155 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 MAP6Q96JE9 813 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 COQ7Q99807 217 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 CDH20Q9HBT6 801 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 PNRC2Q9NPJ4 139 aaKnown RBP13□□□□□ -0.33
HSPG2-201ENST00000374673 DNAJC27Q9NZQ0 273 aa13□□□□□ -0.33
HSPG2-201ENST00000374673 WARS2Q9UGM6 360 aaKnown RBP13□□□□□ -0.33
HSPG2-201ENST00000374673 LOC100509620A0A075B734 347 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-201ENST00000374673 HTR5AP47898 357 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 GDI2P50395 445 aaKnown RBP12.99□□□□□ -0.33
HSPG2-201ENST00000374673 AQP4P55087 323 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 HGFACQ04756 655 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 SLC16A9Q7RTY1 509 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 DCXRQ7Z4W1 244 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 SETD9Q8NE22 299 aa12.99□□□□□ -0.33
HSPG2-201ENST00000374673 NUP37Q8NFH4 326 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms