RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 OR2M5A3KFT3 312 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 NPIPA5E9PKD4 350 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 G3V3Q6 166 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 M0R233 179 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 AQP8O94778 261 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 RGS11O94810 467 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 ISG15P05161 165 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 MELTFP08582 738 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 GIMD1P0DJR0 217 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 GABRA1P14867 456 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 NAGAP17050 411 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 ANXA7P20073 488 aaKnown RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 PTGS2P35354 604 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 GPR85P60893 370 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 NR0B2Q15466 257 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 MPPED2Q15777 294 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 CCDC28AQ8IWP9 274 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 PRSS58Q8IYP2 241 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 OR4C16Q8NGL9 310 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 DUSP19Q8WTR2 217 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 ASB5Q8WWX0 329 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 ASB10Q8WXI3 467 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 PTX4Q96A99 478 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 FOXRED1Q96CU9 486 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 GINS4Q9BRT9 223 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 DPCDQ9BVM2 203 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 ING1Q9UK53 422 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-203ENST00000374490 NPIPA1Q9UND3 350 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 GTF2A1LQ9UNN4 478 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
HMGCL-203ENST00000374490 IGLV3-12A0A075B6K2 115 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 TMEM272A0A1B0GTI8 110 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 H0YC42 278 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
HMGCL-203ENST00000374490 HRGP04196 525 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ITGA5P08648 1049 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 CEACAM1P13688 526 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 GTF2F2P13984 249 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 HTR2CP28335 458 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 MSX1P28360 303 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 TAS2R19P59542 299 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ACY1Q03154 408 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 FOXC1Q12948 553 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 EXOSC2Q13868 293 aaKnown RBP12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PCK2Q16822 640 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ODF4Q2M2E3 257 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PRAMEF17Q5VTA0 474 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 OR7E24Q6IFN5 339 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 RHBDD2Q6NTF9 364 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 UNQ6494/PRO21346Q6UXR6 183 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-203ENST00000374490 SLC36A1Q7Z2H8 476 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 KANSL1Q7Z3B3 1105 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 TMEM229BQ8NBD8 167 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 GPX8Q8TED1 209 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 CCDC107Q8WV48 283 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 POTEKPQ9BYX7 375 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 SLC7A5P2Q9GIP4 190 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-203ENST00000374490 ATG5Q9H1Y0 275 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PIPOXQ9P0Z9 390 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PISDQ9UG56 409 aa12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PPIEQ9UNP9 301 aaKnown RBP12.49□□□□□ -0.41
HMGCL-203ENST00000374490 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 L7N2F9 121 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 ADAM10O14672 748 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 WNT11O96014 354 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 PNPP00491 289 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 LPLP06858 475 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 UBCP0CG48 685 aaKnown RBP12.48□□□□□ -0.41
HMGCL-203ENST00000374490 PTHLHP12272 177 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 MYF5P13349 255 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 MFGE8Q08431 387 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-203ENST00000374490 MELKQ14680 651 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 OPCMLQ14982 345 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 LANCL3Q6ZV70 420 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 COX15Q7KZN9 410 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 ANKRD37Q7Z713 158 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 ADGRE4PQ86SQ3 457 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 SLC26A10Q8NG04 563 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 OR1J4Q8NGS1 313 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 OR13C3Q8NGS6 347 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 SAP25Q8TEE9 199 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 SLC25A44Q96H78 314 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-203ENST00000374490 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 FANCFQ9NPI8 374 aa12.48□□□□□ -0.41
HMGCL-203ENST00000374490 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms