RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 WDFY4Q6ZS81 3184 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1W2PPH5 198 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF208O43345 1280 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 C1QL1O75973 258 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 YIF1AO95070 293 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PMP2P02689 132 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ITGB2P05107 769 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ERCC1P07992 297 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SNRNP70P08621 437 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 H2AFB1P0C5Y9 115 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF735P0CB33 412 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 UBBP0CG47 229 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 UBCP0CG48 685 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 GLI4P10075 376 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ERGP11308 486 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CD33P20138 364 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CPT2P23786 658 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SERPINF1P36955 418 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 LPAR6P43657 344 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RAB28P51157 221 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RPS27AP62979 156 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 UBA52P62987 128 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TFF2Q03403 129 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PDGFRLQ15198 375 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 DHCR24Q15392 516 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TRAM1Q15629 374 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 INPP5JQ15735 1006 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 EEF1A1P5Q5VTE0 462 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CYB5R2Q6BCY4 276 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 FBXO42Q6P3S6 717 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF550Q7Z398 422 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 JAGN1Q8N5M9 183 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 APCDD1LQ8NCL9 501 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 OR5M8Q8NGP6 311 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 OR2G2Q8NGZ5 317 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 AKR7LQ8NHP1 331 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SFXN5Q8TD22 340 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CXorf40AQ8TE69 158 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SECTM1Q8WVN6 248 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 VWCEQ96DN2 955 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 UTP23Q9BRU9 249 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM27Q9HBJ8 222 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RPS10P5Q9NQ39 176 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PRMT8Q9NR22 394 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 UQCC1Q9NVA1 299 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 DNAJB12Q9NXW2 375 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 EPHA6Q9UF33 1036 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 GDF2Q9UK05 429 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RCL1Q9Y2P8 373 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 AMDHD2Q9Y303 409 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PCDHGA1Q9Y5H4 931 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ENTPD2Q9Y5L3 495 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TRANK1O15050 2925 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1B0GTQ1 180 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR14I1A6ND48 311 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR4C45A6NMZ5 311 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 STMND1H3BQB6 276 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EIF1AYO14602 144 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SLC31A1O15431 190 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EIF1BO60739 113 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 NDUFB2O95178 105 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 IFNGP01579 166 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RHOP08100 348 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CEBPBP17676 345 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EIF1P41567 113 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ASCL1P50553 236 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PRKXP51817 358 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 SEC13P55735 322 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 FOXL2P58012 376 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CTXN1P60606 82 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ACTA2P62736 377 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ACTG2P63267 376 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ACTC1P68032 377 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ACTA1P68133 377 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 IL13RA1P78552 427 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 EBPQ15125 230 aaKnown RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF684Q5T5D7 378 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 DHRS7BQ6IAN0 325 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ADAM5Q6NVV9 412 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ARHGAP11AQ6P4F7 1023 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 BAIAP2L2Q6UXY1 529 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 WDFY1Q8IWB7 410 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 PRR22Q8IZ63 422 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 FAM24BQ8N5W8 94 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 CHST4Q8NCG5 386 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM104Q8NE00 496 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 OR1J4Q8NGS1 313 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF563Q8TA94 476 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 MARCH1Q8TCQ1 289 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 BSCL2Q96G97 398 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF558Q96NG5 402 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF587Q96SQ5 575 aaPredicted RBP4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RNF126Q9BV68 326 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 RTN4RQ9BZR6 473 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 INPP5EQ9NRR6 644 aa4.87□□□□□ -1.63
ATG4A-204ENST00000372246 ZFP57Q9NU63 452 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms