RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PRKACAP17612 351 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 ARRB2P32121 409 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 MEOX1P50221 254 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 CLVS2Q5SYC1 327 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 KIRREL1Q96J84 757 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 TSNAXQ99598 290 aaKnown RBP13.37□□□□□ -0.27
NDC1-201ENST00000371429 HES7Q9BYE0 225 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 FAM60AQ9NP50 221 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 TMEM82A0PJX8 343 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 HS3ST1O14792 307 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 GDNFP39905 211 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 RPS27P42677 84 aaKnown RBP13.37□□□□□ -0.27
NDC1-201ENST00000371429 HCCSP53701 268 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 FGFBP1Q14512 234 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 CEACAM16Q2WEN9 425 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 DESI1Q6ICB0 168 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 PHC2Q8IXK0 858 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 OR51A2Q8NGJ7 313 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 SLCO4A1Q96BD0 722 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
NDC1-201ENST00000371429 KCNE1BA0A087WTH5 132 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 NKX2-2O95096 273 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 CHRM2P08172 466 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 ZNF728P0DKX0 622 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 SFRP5Q5T4F7 317 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OR2L13Q8N349 312 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OR51F2Q8NH61 342 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OPALINQ96PE5 141 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 AHCTF1Q8WYP5 2266 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 A0A1W2PPV4 95 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 E9PI62 339 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 XRCC2O43543 280 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 PMPCAQ10713 525 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 PDLIM3Q53GG5 364 aaPredicted RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 LRRC3BQ96PB8 259 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 ZFP64Q9NPA5 681 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 KCNE3Q9Y6H6 103 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 TMEM129A0AVI4 362 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 LILRB5O75023 590 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 UBL3O95164 117 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 CCL4P13236 92 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 ZNF136P52737 540 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 RBMS2Q15434 407 aaKnown RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 JMJD6Q6NYC1 403 aaPredicted RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 WDSUB1Q8N9V3 476 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 BEST4Q8NFU0 473 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OR4A16Q8NH70 328 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 BANF2Q9H503 90 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 ATP6V1G1O75348 118 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 SNRPD2P62316 118 aaKnown RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 C9orf152Q5JTZ5 239 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 VN1R4Q7Z5H5 301 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OR4C3Q8NH37 302 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 SMIM3Q9BZL3 60 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 OR2B2Q9GZK3 357 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 UNKLQ9H9P5 680 aaKnown RBP13.36□□□□□ -0.27
NDC1-201ENST00000371429 TMEM165Q9HC07 324 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 GPR84Q9NQS5 396 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 QPCTLQ9NXS2 382 aa13.36□□□□□ -0.27
NDC1-201ENST00000371429 A0A087WUJ7 227 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 SPDEFO95238 335 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 SOD1P00441 154 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 KANSL1Q7Z3B3 1105 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 OCIAD1Q9NX40 245 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 SHISA8B8ZZ34 492 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 AVPR2P30518 371 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 ZNF649Q9BS31 505 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 OR6C6A6NF89 314 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 AGERQ15109 404 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 LAX1Q8IWV1 398 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 AMER3Q8N944 861 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 GLRA1P23415 457 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 NFYAP23511 347 aaPredicted RBP13.35□□□□□ -0.27
NDC1-201ENST00000371429 PTPN6P29350 595 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 S100A7P31151 101 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 PTGS2P35354 604 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 OR1M1Q8NGA1 313 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 SLCO5A1Q9H2Y9 848 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 KCNG2Q9UJ96 466 aa13.35□□□□□ -0.27
NDC1-201ENST00000371429 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 KIR2DS1A0A191URI9 304 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 FXYD1O00168 92 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 BHLHE40O14503 412 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 KIR2DS4P43632 304 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 KIR2DS1Q14954 304 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 ZNF468Q5VIY5 522 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 WDR74Q6RFH5 385 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 NANOGP1Q8N7R0 232 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 OR2Y1Q8NGV0 311 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
NDC1-201ENST00000371429 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
NDC1-201ENST00000371429 SLC22A23A1A5C7 686 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms