RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 A0A0B4J2A0 478 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 LINC01565O15544 149 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 WISP3O95389 354 aaPredicted RBP10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 PDGFAP04085 211 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 APEHP13798 732 aaKnown RBP10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 NME1P15531 152 aaKnown RBP10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 RAB6AP20340 208 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM71Q6P5X7 295 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 WDSUB1Q8N9V3 476 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 SECTM1Q8WVN6 248 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 ATOH1Q92858 354 aaPredicted RBP10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 ARSGQ96EG1 525 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 WDFY2Q96P53 400 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 OXGR1Q96P68 337 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 LRRC61Q9BV99 259 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 WBP1LQ9NX94 342 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 QPCTLQ9NXS2 382 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 SHPKQ9UHJ6 478 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF223Q9UK11 482 aaPredicted RBP10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 R4GMQ9 66 aa10.77□□□□□ -0.68
DEPDC1-201ENST00000370966 MAGEB4O15481 346 aaPredicted RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 CTSVO60911 334 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 CBX7O95931 251 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 GABRB1P18505 474 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 ANXA7P20073 488 aaKnown RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 TBPP20226 339 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 ALDH3B1P43353 468 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 OR10A3P58181 314 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 TOMM34Q15785 309 aaPredicted RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 BAK1Q16611 211 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC22A25Q6T423 547 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 LINC00696Q6ZRV3 163 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 OR13C5Q8NGS8 318 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 TCTEX1D2Q8WW35 142 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 CMTM3Q96MX0 182 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 CYSLTR2Q9NS75 346 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 B9D1Q9UPM9 204 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 HDGFL3Q9Y3E1 203 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SHANK3Q9BYB0 1731 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 OR6C65A6NJZ3 312 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SNRPGP15A8MWD9 76 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 PMP2P02689 132 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 EIF4EP06730 217 aaKnown RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 ZGLP1P0C6A0 271 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 CHATP28329 748 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 RBP2P50120 134 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 GABRG1Q8N1C3 465 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 OR52H1Q8NGJ2 320 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 NECAP2Q9NVZ3 263 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 EDARQ9UNE0 448 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 KIR2DS1A0A191URI9 304 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 STMND1H3BQB6 276 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 HBE1P02100 147 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 KIR2DS4P43632 304 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 KIR2DS1Q14954 304 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 AADACL3Q5VUY0 350 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SIRT6Q8N6T7 355 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 AMER3Q8N944 861 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 OR51E1Q8TCB6 317 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 ABHD5Q8WTS1 349 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 APH1AQ96BI3 265 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SEH1LQ96EE3 360 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 IP6K3Q96PC2 410 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 WWTR1Q9GZV5 400 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 HRASLSQ9HDD0 168 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SLAMF7Q9NQ25 335 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 SDHAF2Q9NX18 166 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 TRPM6Q9BX84 2022 aa10.77□□□□□ -0.69
DEPDC1-201ENST00000370966 NUPL2O15504 423 aaKnown RBP10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 RNF4P78317 190 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 HYAL1Q12794 435 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF74Q16587 644 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF425Q6IV72 752 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ATF6BQ99941 703 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC22A11Q9NSA0 550 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 OR14J1Q9UGF5 321 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 A0A087WZY1 265 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 A0A1B0GUH1 482 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 SMLR1H3BR10 107 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 LIMS3P0CW19 117 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 LIMS4P0CW20 117 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 TBXA2RP21731 343 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 NPY4RP50391 375 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 SLC25A1P53007 311 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 ZNF266Q14584 549 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 C2orf76Q3KRA6 126 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 AADACL4Q5VUY2 407 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 RDH10Q8IZV5 341 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 FOXQ1Q9C009 403 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 B3GAT1Q9P2W7 334 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 PCDHGA5Q9Y5G8 931 aa10.76□□□□□ -0.69
DEPDC1-201ENST00000370966 HRH3Q9Y5N1 445 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms