RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TBX6O95947 436 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 MT-ND4P03905 459 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CSF3P09919 207 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 IL32P24001 234 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 HLA-DMAP28067 261 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF93P35789 620 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SSPNQ14714 243 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A6Q4U2R8 563 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 APOOLQ6UXV4 268 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC25A45Q8N413 288 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 LRRC18Q8N456 261 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 NAXEQ8NCW5 288 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CSNK2A3Q8NEV1 391 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR4M2Q8NGB6 313 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR10G3Q8NGC4 313 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR51D1Q8NGF3 324 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6S1Q8NH40 331 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 VRK1Q99986 396 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PRSS27Q9BQR3 290 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TMEM59Q9BXS4 323 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SCPEP1Q9HB40 452 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PLEKHJ1Q9NW61 149 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 MED29Q9NX70 200 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PCDHGA5Q9Y5G8 931 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF814B7Z6K7 855 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 HSPA12AO43301 675 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PTP4A3O75365 173 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TCRBP04435 133 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 EPXP11678 715 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 FCGR2AP12318 317 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CD34P28906 385 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 FOXK1P85037 733 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TAGLNQ01995 201 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 MYBPHQ13203 477 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SRSF5Q13243 272 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SMUG1Q53HV7 270 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 JMJD6Q6NYC1 403 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM122CQ6P4D5 195 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF813Q6ZN06 617 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 BEST3Q8N1M1 668 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TEX19Q8NA77 164 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR5T2Q8NGG2 359 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CLDN23Q96B33 292 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 FGGYQ96C11 551 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ST6GAL2Q96JF0 529 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SIGLEC11Q96RL6 698 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PHB2Q99623 299 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 GPA33Q99795 319 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ATF6BQ99941 703 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SYT3Q9BQG1 590 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 JAM3Q9BX67 310 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TGIF2Q9GZN2 237 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 METTL9Q9H1A3 318 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ANKRD10Q9NXR5 420 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 VSX1Q9NZR4 365 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 MRPS28Q9Y2Q9 187 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 NEUROG3Q9Y4Z2 214 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 MYLKQ15746 1914 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 IGF2P01344 180 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF806P0C7X5 589 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SCAND1P57086 179 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TAS2R46P59540 309 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CXADRP78310 365 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 IFITM2Q01629 132 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SPIN3Q5JUX0 258 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM209AQ5JX71 171 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MTFR2Q6P444 385 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM180AQ6UWF9 173 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 STAC2Q6ZMT1 411 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 YRDCQ86U90 279 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SIAH3Q8IW03 269 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 C9orf40Q8IXQ3 194 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SPAG16Q8N0X2 631 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM181AQ8N9Y4 354 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 NOXO1Q8NFA2 376 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 OR5M1Q8NGP8 315 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 NPRL2Q8WTW4 380 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 PTP4A1Q93096 173 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TSPAN32Q96QS1 320 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 CYSLTR2Q9NS75 346 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 LANCL2Q9NS86 450 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ZFP57Q9NU63 452 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SLCO1C1Q9NYB5 712 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 DTX4Q9Y2E6 619 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 STMND1H3BQB6 276 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TEX46H3BTG2 121 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 PLPP3O14495 311 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SMAD9O15198 467 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 SGCEO43556 437 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TNFSF15O95150 251 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 MT-CO3P00414 261 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 TFP02787 698 aa4.79□□□□□ -1.64
SMNDC1-202ENST00000369603 ALDOBP05062 364 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms