RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 C3orf56Q8N813 242 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ZDHHC22Q8N966 263 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 OR13C2Q8NGS9 318 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ST7LQ8TDW4 575 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ACOT11Q8WXI4 607 aaPredicted RBP13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
CKS1B-202ENST00000368436 FNDC11Q9BVV2 318 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 POFUT1Q9H488 388 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 ESM1Q9NQ30 184 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 CMTM6Q9NX76 183 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
CKS1B-202ENST00000368436 A0A087WUU8 490 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 H7C1C5 153 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 PRSS23O95084 383 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 ABHD16AO95870 558 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 IFNW1P05000 195 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 H2AFXP16104 143 aaPredicted RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 GSTM3P21266 225 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 KITLGP21583 273 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 LCN6P62502 163 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 MBOAT2Q6ZWT7 520 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 TREML1Q86YW5 311 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 BPIFB2Q8N4F0 458 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 DVL3Q92997 716 aaPredicted RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 SAMD8Q96LT4 415 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 EMC7Q9NPA0 242 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 FGFR1OP2Q9NVK5 253 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.25
CKS1B-202ENST00000368436 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 PURGQ9UJV8 347 aaKnown RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
CKS1B-202ENST00000368436 CDC42EP2O14613 210 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 CD14P08571 375 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 SBK2P0C263 348 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF26P17031 533 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 EGR1P18146 543 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 FPR2P25090 351 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 TMEM155Q4W5P6 130 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 TBPL2Q6SJ96 375 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 Q6ZR03 302 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 VASH1Q7L8A9 365 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 FAM122BQ7Z309 247 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 LRRC28Q86X40 367 aaPredicted RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 SLC15A3Q8IY34 581 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 DEFB108BQ8NET1 73 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 RCN3Q96D15 328 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 Q96M85 177 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 DCLRE1CQ96SD1 692 aaKnown RBP13.51□□□□□ -0.25
CKS1B-202ENST00000368436 NTN4Q9HB63 628 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 ADAM18Q9Y3Q7 739 aa13.51□□□□□ -0.25
CKS1B-202ENST00000368436 TEX13CA0A0J9YWL9 993 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 PRSS37A4D1T9 235 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SLC22A2O15244 555 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SGCEO43556 437 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SPRY1O43609 319 aaPredicted RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 DOK2O60496 412 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SASH3O75995 380 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 TNFRSF1AP19438 455 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 TNFSF4P23510 183 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 RPL4P36578 427 aaKnown RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 GPR4P46093 362 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 HTR5AP47898 357 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SLC6A9P48067 706 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 UBA52P62987 128 aaKnown RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 LIPEQ05469 1076 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■□□□□ 9.9
CKS1B-202ENST00000368436 IFI44LQ53G44 452 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 MESTQ5EB52 335 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF730Q6ZMV8 503 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 CBLL1Q75N03 491 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 ARPINQ7Z6K5 226 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SPICQ8N5J4 248 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 OR2Z1Q8NG97 314 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 HAVCR1Q96D42 359 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 CMBLQ96DG6 245 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 SIGLEC11Q96RL6 698 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 ANKRD19PQ9H560 264 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 PATZ1Q9HBE1 687 aaKnown RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 ARGLU1Q9NWB6 273 aaPredicted RBP13.5□□□□□ -0.25
CKS1B-202ENST00000368436 IL19Q9UHD0 177 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 STARD10Q9Y365 291 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 CAPN7Q9Y6W3 813 aa13.5□□□□□ -0.25
CKS1B-202ENST00000368436 TRAPPC2LH3BP13 241 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 CXCR6O00574 342 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 ZNF682O95780 498 aa13.49□□□□□ -0.25
CKS1B-202ENST00000368436 CTLA4P16410 223 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms