RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 CLEC9AQ6UXN8 241 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 LRP11Q86VZ4 500 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 OR6V1Q8N148 313 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 ZCCHC24Q8N2G6 241 aaKnown RBP8.47□□□□□ -1.05
CD48-202ENST00000368046 AQP11Q8NBQ7 271 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 NPEPL1Q8NDH3 523 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 OR52E2Q8NGJ4 325 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 SYNPRQ8TBG9 265 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 GIPC3Q8TF64 312 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 NEU4Q8WWR8 484 aaPredicted RBP8.47□□□□□ -1.05
CD48-202ENST00000368046 FAM168AQ92567 244 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 FOXN4Q96NZ1 517 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 TSSK2Q96PF2 358 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 SORCS2Q96PQ0 1159 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 DDOQ99489 341 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 EGLN3Q9H6Z9 239 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 EMC7Q9NPA0 242 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 REV1Q9UBZ9 1251 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 NDRG4Q9ULP0 352 aaKnown RBP8.47□□□□□ -1.05
CD48-202ENST00000368046 FKBP7Q9Y680 259 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 CDH10Q9Y6N8 788 aa8.47□□□□□ -1.05
CD48-202ENST00000368046 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 IGLV1-36A0A0B4J1U3 117 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 OR6C68A6NDL8 312 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 NDUFS8O00217 210 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 DCTN6O00399 190 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 LY6G6DO95868 133 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 IGFBP1P08833 259 aaPredicted RBP8.46□□□□□ -1.06
CD48-202ENST00000368046 CSF3P09919 207 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 SLC25A16P16260 332 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 CENPAP49450 140 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 PDLIM4P50479 330 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 ARHGDIAP52565 204 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 GLO1Q04760 184 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 AQP6Q13520 282 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 ZNF718Q3SXZ3 478 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 CLEC12AQ5QGZ9 265 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 LNX2Q8N448 690 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 ZNF525Q8N782 197 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 GJC3Q8NFK1 279 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 OR10G2Q8NGC3 310 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 OR1J1Q8NGS3 322 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 C10orf105Q8TEF2 133 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 C4orf45Q96LM5 186 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 FEVQ99581 238 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 SYT3Q9BQG1 590 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 TSSK6Q9BXA6 273 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 PLA2G12AQ9BZM1 189 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 RACGAP1Q9H0H5 632 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 HEATR1Q9H583 2144 aaKnown RBP8.46□□□□□ -1.06
CD48-202ENST00000368046 ELOVL3Q9HB03 270 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 DYNLRB1Q9NP97 96 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 MYOZ1Q9NP98 299 aaPredicted RBP8.46□□□□□ -1.06
CD48-202ENST00000368046 RPRD1BQ9NQG5 326 aaKnown RBP8.46□□□□□ -1.06
CD48-202ENST00000368046 SLCO1C1Q9NYB5 712 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 ASH2LQ9UBL3 628 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 DNAJB9Q9UBS3 223 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 GPR160Q9UJ42 338 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 BAIAP2Q9UQB8 552 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 USF3Q68DE3 2245 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 ARID1AO14497 2285 aa8.46□□□□□ -1.06
CD48-202ENST00000368046 IGHV4-30-2A0A087WSY4 118 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 LOC390937A0A1W2PQ73 354 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 ARRDC5A6NEK1 342 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 M0R233 179 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 SGCEO43556 437 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 ICMTO60725 284 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 FKBP6O75344 327 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 LY6HO94772 140 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 CLPTM1O96005 669 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 NGFP01138 241 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TFP02787 698 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TP53P04637 393 aaPredicted RBP8.45□□□□□ -1.06
CD48-202ENST00000368046 HEXAP06865 529 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TUBG1P23258 451 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 GCH1P30793 250 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 WNT5AP41221 380 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 KLF3P57682 345 aaPredicted RBP8.45□□□□□ -1.06
CD48-202ENST00000368046 ERVS71-1P61550 626 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 HIST1H3AP68431 136 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 CBX1P83916 185 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.45□□□□□ -1.06
CD48-202ENST00000368046 SLC36A3Q495N2 470 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 HIST2H3PS2Q5TEC6 136 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 HIST2H3AQ71DI3 136 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TMEM179BQ7Z7N9 219 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 SDR9C7Q8NEX9 313 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 OR2T33Q8NG76 320 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 OR8D4Q8NGM9 314 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 SLCO4A1Q96BD0 722 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 NIPSNAP1Q9BPW8 284 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 CDADC1Q9BWV3 514 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 OR51B6Q9H340 312 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TUBG2Q9NRH3 451 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 TBCCD1Q9NVR7 557 aa8.45□□□□□ -1.06
CD48-202ENST00000368046 PLEK2Q9NYT0 353 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms