RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 APOBEC3BQ9UH17 382 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 RALYQ9UKM9 306 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 WASHC3Q9Y3C0 194 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 TNCP24821 2201 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 PIRO00625 290 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 GPR32O75388 356 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 IL26Q9NPH9 171 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 TRAPPC1Q9Y5R8 145 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 LEFTY2O00292 366 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 MMP11P24347 488 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 SLC7A9P82251 487 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 RNASEKQ6P5S7 137 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF66Q6ZN08 573 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 CMTM4Q8IZR5 234 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 SCAMP4Q969E2 229 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 TMEM184BQ9Y519 407 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 OARD1Q9Y530 152 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 LATO43561 262 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 ITGB8P26012 769 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 HUS1BQ8NHY5 278 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 ASB11Q8WXH4 323 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 CPNE4Q96A23 557 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 WDR83Q9BRX9 315 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 GDF1P27539 372 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 TRHRP34981 398 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 IKZF1Q13422 519 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 NSUN5P2Q63ZY6 315 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 PELI3Q8N2H9 469 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 PRRC1Q96M27 445 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 USP2O75604 605 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR3A1P47881 315 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 SEMA3BQ13214 749 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 COL5A1-AS1Q5SY13 56 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 EXOGQ9Y2C4 368 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 SLIT2O94813 1529 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 PYCARD-AS1I3L0S3 204 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 SUSD5O60279 629 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 BMP5P22003 454 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 FOLR3P41439 243 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 TAS2R46P59540 309 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 MEPCEQ7L2J0 689 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 CLEC14AQ86T13 490 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 RTP3Q9BQQ7 232 aa10.2□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZC3H12DA2A288 527 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 FBLL1A6NHQ2 334 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 LIPNQ5VXI9 398 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 Q6ZTK2 550 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PLXDC1Q8IUK5 500 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 OIT3Q8WWZ8 545 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 C1orf123Q9NWV4 160 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 A0A1W2PPE2 198 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 M0QZK8 103 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GGCTO75223 188 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 ZNF888P0CJ79 500 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GUCA2BQ16661 112 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 SYT14P1Q58G82 188 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 NXPE4Q6UWF7 544 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 FAM57BQ71RH2 274 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GPX8Q8TED1 209 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 NUDT22Q9BRQ3 303 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 TIMM29Q9BSF4 260 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PTP4A3O75365 173 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CD1CP29017 333 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 ISL2Q96A47 359 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 B4GALT6Q9UBX8 382 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 TAS2R38P59533 333 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GNB2P62879 340 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PPP2CAP67775 309 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 C1orf220Q5T0J3 134 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 MARCH8Q5T0T0 291 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 A0A0D9SEW6 157 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 DAP3P51398 398 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 SLC25A35Q3KQZ1 300 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CLEC1AQ8NC01 280 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 WNT2BQ93097 391 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 INPP5EQ9NRR6 644 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 SSUH2Q9Y2M2 353 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 A0A0U1RQS6 177 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 MEGF11A6BM72 1044 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 OR5K3A6NET4 321 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 NFKBIEO00221 500 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 ELAVL4P26378 380 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 ABCD3P28288 659 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 SIRPAP78324 504 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 PITX1P78337 314 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 IER5LQ5T953 404 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 STEAP1BQ6NZ63 245 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 LPCAT3Q6P1A2 487 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 ST6GALNAC4Q9H4F1 302 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 BTNL2Q9UIR0 455 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 NDRG4Q9ULP0 352 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 EFSO43281 561 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 AQP8O94778 261 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 RAB40ALP0C0E4 278 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 SULT1A2P50226 295 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CPEB2Q7Z5Q1 589 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 RAB40AQ8WXH6 277 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 GABARAPL1Q9H0R8 117 aa10.19□□□□□ -0.78
CDC42BPA-205ENST00000366769 CLMPQ9H6B4 373 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms