RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 EPHA1P21709 976 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 DHPSP49366 369 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 EXOSC6Q5RKV6 272 aaKnown RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CBLN3Q6UW01 205 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 MCEMP1Q8IX19 187 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 OR14K1Q8NGZ2 314 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 DDIT4LQ96D03 193 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 JAM3Q9BX67 310 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 URGCP-MRPS24S4R325 110 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 PARP14Q460N5 1801 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 MED12Q93074 2177 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 PRAMEF26H0Y7S4 382 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 JMJD7P0C870 316 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CLINT1Q14677 625 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 PAN3Q58A45 887 aaKnown RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 OR4D6Q8NGJ1 314 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 ADAMTS18Q8TE60 1221 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 TSLPQ969D9 159 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 SLC25A32Q9H2D1 315 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CUTCQ9NTM9 273 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 TDRD15B5MCY1 1934 aaKnown RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 HOXB9P17482 250 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 FLI1Q01543 452 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 DHRS2Q13268 280 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 WDR38Q5JTN6 314 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 BAP18Q8IXM2 172 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 SLC22A24Q8N4F4 322 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 FAM213BQ8TBF2 198 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 PHOSPHO2Q8TCD6 241 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CCDC74AQ96AQ1 378 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 MOGAT1Q96PD6 335 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 SLCO5A1Q9H2Y9 848 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 EVA1AQ9H8M9 152 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 SULT2B1O00204 365 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 AKR7A3O95154 331 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CISD3P0C7P0 127 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CNR1P21554 472 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 RPL27P61353 136 aaKnown RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 ACSM1Q08AH1 577 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 VWA2Q5GFL6 755 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF626Q68DY1 528 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 ANKRD33Q7Z3H0 272 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 MDGA2Q7Z553 956 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 FAM160A2Q8N612 972 aaPredicted RBP12.61□□□□□ -0.39
COL6A1-201ENST00000361866 SUMF1Q8NBK3 374 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 BPIFCQ8NFQ6 507 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 CHST6Q9GZX3 395 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 LHX9Q9NQ69 397 aa12.61□□□□□ -0.39
COL6A1-201ENST00000361866 A0A087WUJ7 227 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 STMND1H3BQB6 276 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 GPR31O00270 319 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 IL5P05113 134 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 NR2C1P13056 603 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 GABRA1P14867 456 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 NAGAP17050 411 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 ATP1B3P54709 279 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 SLC17A1Q14916 467 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OR51A4Q8NGJ6 313 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 BAHD1Q8TBE0 780 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PIGTQ969N2 578 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 GPR137Q96N19 417 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 KCNJ15Q99712 375 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 FBRSQ9HAH7 460 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 MRPS18AQ9NVS2 196 aaKnown RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 ZNF223Q9UK11 482 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 DKKL1Q9UK85 242 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 RAB22AQ9UL26 194 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 A0A087WV62 115 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 LINC01553A4QN01 128 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OTOL1A6NHN0 477 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 SULT1C2O00338 296 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OIP5O43482 229 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 DRD3P35462 400 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PPP1CAP62136 330 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 KLF9Q13886 244 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PRAMEF20Q5VT98 475 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OR51E1Q8TCB6 317 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 HHIPQ96QV1 700 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 B9D1Q9UPM9 204 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 FCGR2AP12318 317 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PRTGQ2VWP7 1150 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 TMEM176BQ3YBM2 270 aaPredicted RBP12.6□□□□□ -0.39
COL6A1-201ENST00000361866 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OR2W3Q7Z3T1 314 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 BMFQ96LC9 184 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 LRRC3BQ96PB8 259 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 OR2A5Q96R48 311 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 SYT3Q9BQG1 590 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 ABHD6Q9BV23 337 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
COL6A1-201ENST00000361866 PCDHGA5Q9Y5G8 931 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms