RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SLC37A1P57057 533 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 KCTD9Q7L273 389 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 C12orf45Q8N5I9 185 aaPredicted RBP9.5□□□□□ -0.89
SMC3-201ENST00000361804 BHLHE23Q8NDY6 225 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 OR13C8Q8NGS7 320 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 OR8B4Q96RC9 309 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 SLC38A3Q99624 504 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 ABHD6Q9BV23 337 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 ZNF275Q9NSD4 429 aaPredicted RBP9.5□□□□□ -0.89
SMC3-201ENST00000361804 D6RAR5 112 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 SEMA4FO95754 770 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 HPP00738 406 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 CXCR1P25024 350 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 CD1CP29017 333 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 TFAP2EQ6VUC0 442 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 BPIFB2Q8N4F0 458 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 EID2Q8N6I1 236 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 BPIFCQ8NFQ6 507 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 OR2I1PQ8NGU4 316 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 GPX8Q8TED1 209 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 MRGPRFQ96AM1 343 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 LRFN5Q96NI6 719 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 SOX7Q9BT81 388 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 ZNF471Q9BX82 626 aaPredicted RBP9.5□□□□□ -0.89
SMC3-201ENST00000361804 FOXQ1Q9C009 403 aa9.5□□□□□ -0.89
SMC3-201ENST00000361804 OR5H14A6NHG9 310 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 EEF1E1-BLOC1S5C9J1V9 151 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 P2RY10O00398 339 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 SLC17A2O00624 439 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 AKT2P31751 481 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 MECP2P51608 486 aaKnown RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 MRPS10P82664 201 aaKnown RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 UBXN2BQ14CS0 331 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 OVCH2Q7RTZ1 564 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 ADAD2Q8NCV1 583 aaKnown RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 CENPMQ9NSP4 180 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 HRH3Q9Y5N1 445 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 PIAS3Q9Y6X2 628 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 HTR2CP28335 458 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 GABRA4P48169 554 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 ARRB1P49407 418 aaPredicted RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 SKP1P63208 163 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 C1orf189Q5VU69 101 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 CHST4Q8NCG5 386 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 TAS2R3Q9NYW6 316 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 MRPS33Q9Y291 106 aaKnown RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 A0A1W2PPC1 479 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 ITGB2P05107 769 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 PNMTP11086 282 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 PI3P19957 117 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 PMPCAQ10713 525 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 CDNFQ49AH0 187 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 PPP1R1CQ8WVI7 109 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 SLC41A2Q96JW4 573 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 VRK1Q99986 396 aaPredicted RBP9.49□□□□□ -0.89
SMC3-201ENST00000361804 NUDT22Q9BRQ3 303 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 EMC6Q9BV81 110 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 LRRC61Q9BV99 259 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 CST11Q9H112 138 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 TMEM231Q9H6L2 316 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 PTGES2Q9H7Z7 377 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 MED29Q9NX70 200 aa9.49□□□□□ -0.89
SMC3-201ENST00000361804 DSPP15924 2871 aaKnown RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 GPR31O00270 319 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 SRPX2O60687 465 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 LDOC1O95751 146 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 BGLAPP02818 100 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 DCNP07585 359 aaKnown RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 ZNF735P0CB33 412 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 VAMP1P23763 118 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 PPP1R1AQ13522 171 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 RSPO4Q2I0M5 234 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 PXT1Q8NFP0 134 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 OR13C3Q8NGS6 347 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 ZNF587Q96SQ5 575 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 NUDT9Q9BW91 350 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 TPSD1Q9BZJ3 242 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 PRSS37A4D1T9 235 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 DNASE2O00115 360 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 AKR1C4P17516 323 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■■■■ 41
SMC3-201ENST00000361804 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 TMEM185AQ8NFB2 350 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 PMM1Q92871 262 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 CPED1A4D0V7 1026 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 METTL12A8MUP2 240 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 C2CD4DB7Z1M9 353 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 ADAM10O14672 748 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 SLC25A12O75746 678 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 SLC2A1P11166 492 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 GNB3P16520 340 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 C4BPBP20851 252 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 CXADRP78310 365 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 RASGEF1BQ0VAM2 473 aa9.48□□□□□ -0.89
SMC3-201ENST00000361804 JMJD6Q6NYC1 403 aaPredicted RBP9.48□□□□□ -0.89
SMC3-201ENST00000361804 ZNF679Q8IYX0 411 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms