RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 FRG2CA6NGY1 282 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF701M0R085 212 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LAP3P28838 519 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TCTN3Q6NUS6 607 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 DHRS4L2Q6PKH6 230 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 Q6ZS52 159 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LACC1Q8IV20 430 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 KDM8Q8N371 416 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 C17orf78Q8N4C9 275 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 RASD2Q96D21 266 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 BARX1Q9HBU1 254 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 CPNE5Q9HCH3 593 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ASH2LQ9UBL3 628 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF225Q9UK10 706 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TNFSF11O14788 317 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 NRASP01111 189 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 MGST1P10620 155 aaKnown RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 GIFP27352 417 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 BPIFB3P59826 476 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 RNF4P78317 190 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LHX8Q68G74 356 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LILRA3Q8N6C8 439 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF439Q8NDP4 499 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 OR1J1Q8NGS3 322 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 FAM3DQ96BQ1 224 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SLAMF6Q96DU3 332 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LRFN5Q96NI6 719 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SORT1Q99523 831 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TUBG2Q9NRH3 451 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SLCO1C1Q9NYB5 712 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 RPA2P15927 270 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 RPS27AP62979 156 aaKnown RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 UBA52P62987 128 aaKnown RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 GLYATL3Q5SZD4 288 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TRILQ7L0X0 811 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 THNSL2Q86YJ6 484 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TMEM104Q8NE00 496 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SMAP2Q8WU79 429 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 TMEM174Q8WUU8 243 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF486Q96H40 463 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF71Q9NQZ8 489 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 PTTG3PQ9NZH4 202 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ONECUT1Q9UBC0 465 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 A0A0D9SG52 128 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 FGF17O60258 216 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 MRPL58Q14197 206 aaKnown RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 FZD2Q14332 565 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SYT14P1Q58G82 188 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 RFPL4BQ6ZWI9 263 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF546Q86UE3 836 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 OR10AD1Q8NGE0 317 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LAMP3Q9UQV4 416 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 PAPLNO95428 1278 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 MTNR1BP49286 362 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
CLIP1-203ENST00000361654 MOB3BQ86TA1 216 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 ENTHD1Q8IYW4 607 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 SDF2Q99470 211 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 LRRC61Q9BV99 259 aa9.99□□□□□ -0.81
CLIP1-203ENST00000361654 A0A087WV62 115 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 NCBP2LA6PVI3 153 aaKnown RBP9.98□□□□□ -0.81
CLIP1-203ENST00000361654 ICOSLGO75144 302 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 CD3EP07766 207 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 BMP5P22003 454 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 CD82P27701 267 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 LEXMQ3ZCV2 418 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 MDGA2Q7Z553 956 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR2L13Q8N349 312 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TERTO14746 1132 aaKnown RBP9.98□□□□□ -0.81
CLIP1-203ENST00000361654 DHHO43323 396 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 ARRB2P32121 409 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 PSMB3P49720 205 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 SLC35A2P78381 396 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TMEM81Q6P7N7 255 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 FJX1Q86VR8 437 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 ARIH2OSQ8N7S6 290 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR6K3Q8NGY3 331 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR2T6Q8NHC8 308 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 PRR7Q8TB68 274 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 ST8SIA4Q92187 359 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 APOBEC3DQ96AK3 386 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR2M2Q96R28 347 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TXNL4BQ9NX01 149 aaKnown RBP9.98□□□□□ -0.81
CLIP1-203ENST00000361654 CHD4Q14839 1912 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 HLA-HP01893 362 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 SMIM18P0DKX4 95 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TEAD1P28347 426 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 MEOX1P50221 254 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR2G6Q5TZ20 316 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 TBPL2Q6SJ96 375 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR51H1Q8NH63 302 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 FBXO24O75426 580 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 OR10A3P58181 314 aa9.98□□□□□ -0.81
CLIP1-203ENST00000361654 PMPCAQ10713 525 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms