RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 OR1C1Q15619 314 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 WDR74Q6RFH5 385 aaPredicted RBP12.23□□□□□ -0.45
LDB3-202ENST00000361373 TMEM99Q8N816 258 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 FGF20Q9NP95 211 aaPredicted RBP12.23□□□□□ -0.45
LDB3-202ENST00000361373 R4GMQ9 66 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ARL3P36405 182 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 TAS2R30P59541 319 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ZNF425Q6IV72 752 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 DNAJC5GQ8N7S2 189 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ZNF321PQ8N8H1 164 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 EID2BQ96D98 161 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 DUSP15Q9H1R2 295 aaPredicted RBP12.23□□□□□ -0.45
LDB3-202ENST00000361373 NDUFB11Q9NX14 153 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 PCDHGA5Q9Y5G8 931 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 KLK10O43240 276 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 SLC2A1P11166 492 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 FOLR1P15328 257 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 TRIP6Q15654 476 aaKnown RBP12.23□□□□□ -0.45
LDB3-202ENST00000361373 ZNF793Q6ZN11 406 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 SLC25A46Q96AG3 418 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 TECTBQ96PL2 329 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 TRGV5A0A0B4J1U4 118 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 A0A1W2PPC1 479 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 A8MXE2 369 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 GRPP07492 148 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ETV1P50549 477 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 SLC9A3R2Q15599 337 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 GIMAP1Q8WWP7 306 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 ERVMER34-1Q9H9K5 563 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 KCNIP2Q9NS61 270 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 SIRT5Q9NXA8 310 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 LUZP4Q9P127 313 aa12.23□□□□□ -0.45
LDB3-202ENST00000361373 A0A1W2PS29 197 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SPDEFO95238 335 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 C21orf58P58505 322 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 TFAP2EQ6VUC0 442 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 TMPRSS11FQ6ZWK6 438 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 OR51E1Q8TCB6 317 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SLCO4A1Q96BD0 722 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 PLEKHF2Q9H8W4 249 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 C12orf10Q9HB07 376 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 HAO2Q9NYQ3 351 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SLC5A6Q9Y289 635 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 TRABD2BA6NFA1 517 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 OTOL1A6NHN0 477 aaPredicted RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 PMS2P2O95744 297 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 SLC17A1Q14916 467 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 EGFL6Q8IUX8 553 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 LGI3Q8N145 548 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 OR4A16Q8NH70 328 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 UBE2FQ969M7 185 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SMIM19Q96E16 107 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 CNTNAP3BQ96NU0 1288 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 GPR87Q9BY21 358 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 PLK3Q9H4B4 646 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 NPAP1Q9NZP6 1156 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 PCOLCE2Q9UKZ9 415 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 A0A1B0GTQ1 180 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 GABARAPH6UMI1 98 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 K7EPK0 472 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SHOXO15266 292 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 KITLGP21583 273 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.22□□□□□ -0.45
LDB3-202ENST00000361373 FAM71E2Q8N5Q1 922 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 H1FXQ92522 213 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SCN1AP35498 2009 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 ANKRD61A6NGH8 418 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 SH2D1BO14796 132 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 LIPCP11150 499 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 HTR2BP41595 481 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 NCCRP1Q6ZVX7 275 aaPredicted RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 OR11G2Q8NGC1 345 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 MED29Q9NX70 200 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 EXO1Q9UQ84 846 aaKnown RBP12.22□□□□□ -0.45
LDB3-202ENST00000361373 ATP23Q9Y6H3 246 aa12.22□□□□□ -0.45
LDB3-202ENST00000361373 TRIM64CA6NLI5 447 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 ALG1L2C9J202 215 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 GUSBP08236 651 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 CHRNB1P11230 501 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 MYF5P13349 255 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 APEHP13798 732 aaKnown RBP12.21□□□□□ -0.45
LDB3-202ENST00000361373 ZIC1Q15915 447 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 EIF2S3LQ2VIR3 472 aaKnown RBP12.21□□□□□ -0.45
LDB3-202ENST00000361373 ANKRD37Q7Z713 158 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 BEST4Q8NFU0 473 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 HRASLSQ9HDD0 168 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 KCNJ16Q9NPI9 418 aa12.21□□□□□ -0.45
LDB3-202ENST00000361373 B9D1Q9UPM9 204 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms