RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 DUSP7Q16829 419 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 ARMC4Q5T2S8 1044 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 ZNF774Q6NX45 483 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 Q6YL49 198 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 KLBQ86Z14 1044 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 POU5F2Q8N7G0 328 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 C11orf65Q8NCR3 313 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 ITLN1Q8WWA0 313 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 NSMAFQ92636 917 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
VPS29-201ENST00000360579 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
VPS29-201ENST00000360579 FAM71F1Q96KD3 344 aaPredicted RBP11.59□□□□□ -0.55
VPS29-201ENST00000360579 COG8Q96MW5 612 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 OR2V2Q96R30 315 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 PCDHAC1Q9H158 963 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 CENPHQ9H3R5 247 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 TBCCD1Q9NVR7 557 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 VAPAQ9P0L0 249 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 SLAMF8Q9P0V8 285 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 POMT1Q9Y6A1 747 aa11.59□□□□□ -0.55
VPS29-201ENST00000360579 TRBV5-3A0A0A0MS03 114 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 SLC22A31A6NKX4 558 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 FSTL3O95633 263 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 IGF2P01344 180 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 MT-ND1P03886 318 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 SELEP16581 610 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 FUT1P19526 365 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 CD247P20963 164 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 LAP3P28838 519 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 AQP2P41181 271 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 MMP16P51512 607 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 RELBQ01201 579 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 HNRNPA0Q13151 305 aaKnown RBP11.58□□□□□ -0.56
VPS29-201ENST00000360579 TAF9Q16594 264 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 HIST2H2BDQ6DRA6 164 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 ASPHD2Q6ICH7 369 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 SLC27A4Q6P1M0 643 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 SYT9Q86SS6 491 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 MREGQ8N565 214 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 ANKRD42Q8N9B4 389 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 DACT3Q96B18 629 aaPredicted RBP11.58□□□□□ -0.56
VPS29-201ENST00000360579 SPDL1Q96EA4 605 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 RBP7Q96R05 134 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 WACQ9BTA9 647 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 ALG12Q9BV10 488 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 CHIAQ9BZP6 476 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 IKZF5Q9H5V7 419 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 TMEM165Q9HC07 324 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 GCM1Q9NP62 436 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 MEPEQ9NQ76 525 aaPredicted RBP11.58□□□□□ -0.56
VPS29-201ENST00000360579 TNFRSF19Q9NS68 423 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 RNF114Q9Y508 228 aa11.58□□□□□ -0.56
VPS29-201ENST00000360579 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 C12orf71A8MTZ7 269 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 M0QX08 132 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 OR7A10O76100 309 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 COX5BP10606 129 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 RBM34P42696 430 aaKnown RBP11.57□□□□□ -0.56
VPS29-201ENST00000360579 FMODQ06828 376 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 TNFAIP8L3Q5GJ75 292 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 PAGE3Q5JUK9 113 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 Q6ZR03 302 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 MAVSQ7Z434 540 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 PTOV1Q86YD1 416 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 RBM45Q8IUH3 476 aaKnown RBP11.57□□□□□ -0.56
VPS29-201ENST00000360579 SLC30A8Q8IWU4 369 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 GPR32P1Q8NGA4 272 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 OR8B3Q8NGG8 313 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 SSMEM1Q8WWF3 244 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 DYRK2Q92630 601 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 HDAC2Q92769 488 aaKnown RBP11.57□□□□□ -0.56
VPS29-201ENST00000360579 CMBLQ96DG6 245 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 SGTBQ96EQ0 304 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 OR8B2Q96RD0 313 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 NUDT16L1Q9BRJ7 211 aaKnown RBP11.57□□□□□ -0.56
VPS29-201ENST00000360579 TXNIPQ9H3M7 391 aa11.57□□□□□ -0.56
VPS29-201ENST00000360579 IGKV1D-43A0A0B4J1Z2 117 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 CLPXO76031 633 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 ALX3O95076 343 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 OPN1SWP03999 348 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 MELTFP08582 738 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 MSR1P21757 451 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 PITPNBP48739 271 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 WDR4P57081 412 aaKnown RBP11.56□□□□□ -0.56
VPS29-201ENST00000360579 PRR20EP86478 221 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 PRR20CP86479 221 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 PRR20DP86480 221 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 PRR20BP86481 221 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 PRR20AP86496 221 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 GUCY1A3Q02108 690 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 CYP51A1Q16850 503 aa11.56□□□□□ -0.56
VPS29-201ENST00000360579 CROCCP2Q86T23 111 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms