RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SFTA3P0C7M3 94 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ACSM4P0C7M7 580 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 POU3F1Q03052 451 aaPredicted RBP12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 DND1Q8IYX4 353 aaKnown RBP12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 GNPNAT1Q96EK6 184 aaPredicted RBP12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ANTXRLA6NF34 631 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CD1EP15812 388 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 GABRB1P18505 474 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 WDR76Q9H967 626 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 RAB22AQ9UL26 194 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF840PA6NDX5 716 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CLEC2LP0C7M8 214 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 PRSS56P0CW18 603 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 VRK2Q86Y07 508 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 OR2L13Q8N349 312 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 OR4D10Q8NGI6 311 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 GPR150Q8NGU9 434 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 CYB5R1Q9UHQ9 305 aa12.17□□□□□ -0.46
SRGAP3-201ENST00000360413 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 A0A087WV62 115 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 SSSCA1O60232 199 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 MT-ATP6P00846 226 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF26P17031 533 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 SDHAP31040 664 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RAD52P43351 418 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 GLYATL3Q5SZD4 288 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 OSTM1Q86WC4 334 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 NUDT22Q9BRQ3 303 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF593O00488 134 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 TSPAN31Q12999 210 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF761Q86XN6 746 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 LRRC18Q8N456 261 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 C11orf40Q8WZ69 217 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 E5RGE8 158 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PIRO00625 290 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 POLR2IP36954 125 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PM20D1Q6GTS8 502 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ACOT4Q8N9L9 421 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 OR5AP2Q8NGF4 316 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ALG12Q9BV10 488 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 WNK2Q9Y3S1 2297 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 TTRP02766 147 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PMCHP20382 165 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 HTR1FP30939 366 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PPP1CAP62136 330 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PMS2P11Q13670 270 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 OVCH1Q7RTY7 1134 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 CLEC2DQ9UHP7 191 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 CD38P28907 300 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 FCGR2CP31995 323 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 PIGAP37287 484 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RAB6CQ53S08 254 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 SMG9Q9H0W8 520 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 TPOP07202 933 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ALDOCP09972 364 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 RXFP4Q8TDU9 374 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 ADOQ96SZ5 270 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 TRAPPC1Q9Y5R8 145 aa12.16□□□□□ -0.46
SRGAP3-201ENST00000360413 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 PSMB6P28072 239 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 LCN15Q6UWW0 184 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 TFAP2EQ6VUC0 442 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 DEGS1O15121 323 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 SDHBP21912 280 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 HSD17B8Q92506 261 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 IKZF5Q9H5V7 419 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 KIAA1324LA8MWY0 1029 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 HMGN2P05204 90 aaKnown RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 CPMP14384 443 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 ACHEP22303 614 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 CLDN20P56880 219 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 PRRG2O14669 202 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 NXNL2Q5VZ03 156 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 B3GNTL1Q67FW5 361 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 OR6K3Q8NGY3 331 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC35A4Q96G79 324 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 DHRS4Q9BTZ2 278 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 ESRP2Q9H6T0 727 aaKnown RBP12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 AQP7P3A6NL99 342 aa12.15□□□□□ -0.46
SRGAP3-201ENST00000360413 NPY5RQ15761 445 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms