RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HRH1P35367 487 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SERPINF1P36955 418 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 EMP2P54851 167 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 PRMT2P55345 433 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 POU3F1Q03052 451 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 GLO1Q04760 184 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF616Q08AN1 781 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 PPP1R1AQ13522 171 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 EBPQ15125 230 aaKnown RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TOMM34Q15785 309 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MESTQ5EB52 335 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 NKAIN2Q5VXU1 208 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF440Q8IYI8 595 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF321PQ8N8H1 164 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 FGF14Q92915 247 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TSLPQ969D9 159 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC25A28Q96A46 364 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 LDAHQ9H6V9 325 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 GAREM1Q9H706 876 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 VSX1Q9NZR4 365 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 LOC107986453A0A1B0GWG9 222 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TUBAL3A6NHL2 446 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 HMSDA8MTL9 139 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC17A2O00624 439 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ARPC3O15145 178 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CRTAPO75718 401 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TPT1P13693 172 aaKnown RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 RORAP35398 523 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC17A1Q14916 467 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM225Q6GV28 225 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ADGRE4PQ86SQ3 457 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CD300LFQ8TDQ1 290 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MARVELD3Q96A59 401 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 MRPS24Q96EL2 167 aaKnown RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ZC3H10Q96K80 434 aaKnown RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 PRRT1Q99946 306 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC25A21Q9BQT8 299 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-203ENST00000358528 CRB3Q9BUF7 120 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 C20orf24Q9BUV8 137 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SLC25A32Q9H2D1 315 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 SFXN1Q9H9B4 322 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 PILRAQ9UKJ1 303 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 TMED7Q9Y3B3 224 aa5.94□□□□□ -1.46
CSDE1-203ENST00000358528 ASXL3Q9C0F0 2248 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 METTL12A8MUP2 240 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 SLC33A1O00400 549 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ICOSLGO75144 302 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 LYPD3O95274 346 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 PGCP20142 388 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ALOX5APP20292 161 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 COL9A1P20849 921 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 FMODQ06828 376 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 MFGE8Q08431 387 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ELOCQ15369 112 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 TOMM20Q15388 145 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 GUCA2BQ16661 112 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 C11orf87Q6NUJ2 197 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 FAM160A2Q8N612 972 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 C19orf47Q8N9M1 422 aaKnown RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 OR4K17Q8NGC6 315 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 OR2AJ1Q8NGZ0 328 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 TOE1Q96GM8 510 aaKnown RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ABHD6Q9BV23 337 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 PBX4Q9BYU1 374 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 TPSD1Q9BZJ3 242 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 CST11Q9H112 138 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 RPS10P5Q9NQ39 176 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 LSM5Q9Y4Y9 91 aaKnown RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 KIAA1671Q9BY89 1806 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 IGHV3-20A0A0C4DH32 117 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 OR2M5A3KFT3 312 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 PHYHO14832 338 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 MED6O75586 246 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 UPK3AO75631 287 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 SNAPC5O75971 98 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 SEMA4FO95754 770 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 SNRNP70P08621 437 aaKnown RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 PPT1P50897 306 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 CLDN6P56747 220 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 FOXL2P58012 376 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 PDZK1IP1Q13113 114 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 UBXN2BQ14CS0 331 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 MOGAT2Q3SYC2 334 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 MANEAQ5SRI9 462 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ATPAF1Q5TC12 328 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ACOT7LQ6ZUV0 252 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ABHD12BQ7Z5M8 362 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 HSD17B13Q7Z5P4 300 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 NAXDQ8IW45 347 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF679Q8IYX0 411 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 OR4K15Q8NH41 348 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 SHARPINQ9H0F6 387 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 POLE3Q9NRF9 147 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 MED29Q9NX70 200 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF629Q9UEG4 869 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-203ENST00000358528 OR52A1Q9UKL2 312 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM200CA6NKL6 621 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 G3V3Q6 166 aa5.93□□□□□ -1.46
CSDE1-203ENST00000358528 TXNL1O43396 289 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms