RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 PRSS35Q8N3Z0 413 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 ANGPTL6Q8NI99 470 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 MCHR2Q969V1 340 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 DACT3Q96B18 629 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 WDR77Q9BQA1 342 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 DDA1Q9BW61 102 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 DLL4Q9NR61 685 aa12.8□□□□□ -0.36
NIPAL3-203ENST00000358028 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 XRCC3O43542 346 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 GMDSO60547 372 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 NOS1APO75052 506 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 ONECUT2O95948 504 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 IL5P05113 134 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 CPN1P15169 458 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 IL11P20809 199 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 MELKQ14680 651 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TOMM20Q15388 145 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 DCAF12Q5T6F0 453 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF385CQ66K41 422 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC18B1Q6NT16 456 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 OR8H1Q8NGG4 311 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SNIP1Q8TAD8 396 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 RELTQ969Z4 430 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 GPN1Q9HCN4 374 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 MRPL22Q9NWU5 206 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TAS2R8Q9NYW2 309 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SEC16AO15027 2179 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SPARCP09486 303 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 CTLA4P16410 223 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 NAGAP17050 411 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 C4BPBP20851 252 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 DNASE1P24855 282 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 APOBEC1P41238 236 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 DLX5P56178 289 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 CLDN12P56749 244 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 ROM1Q03395 351 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 ZP4Q12836 540 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 MEP1BQ16820 701 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 WDR38Q5JTN6 314 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TMEM164Q5U3C3 297 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 OTPQ5XKR4 325 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 SFRP4Q6FHJ7 346 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 MTFR2Q6P444 385 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TEX261Q6UWH6 196 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 CPEB2Q7Z5Q1 589 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 OR5L2Q8NGL0 311 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 OR10AC1Q8NH08 325 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 RNF138Q8WVD3 245 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 NPAS1Q99742 590 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 NPDC1Q9NQX5 325 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 MED11Q9P086 117 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 U3KQ87 197 aa12.79□□□□□ -0.36
NIPAL3-203ENST00000358028 NDUFB6O95139 128 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF28P17035 718 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 MFSD13AQ14CX5 517 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 GLDNQ6ZMI3 551 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC35D2Q76EJ3 337 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 SERPINA12Q8IW75 414 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 OR11H4Q8NGC9 324 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 OR8K3Q8NH51 312 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 RNF128Q8TEB7 428 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 SORCS2Q96PQ0 1159 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 NOX3Q9HBY0 568 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
NIPAL3-203ENST00000358028 MGAQ8IWI9 3026 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 TRAV8-7A0A075B6U6 113 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 LINC00862A6NCI5 91 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 A6NIZ1 184 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 MS4A18H0YCH9 400 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 SLC22A5O76082 557 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 HPXP02790 462 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 CSF1P09603 554 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 FGF5P12034 268 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 HLA-DOBP13765 273 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 IFNGR1P15260 489 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 CRABP1P29762 137 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 OR3A3P47888 321 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 VEGFCP49767 419 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 ZP1P60852 638 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 RAP1BP61224 184 aa12.77□□□□□ -0.36
NIPAL3-203ENST00000358028 RAP1AP62834 184 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms