RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OTOSQ8NHW6 89 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF75AQ96N20 296 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 OR2H1Q9GZK4 316 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 WNT5BQ9H1J7 359 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 RNF121Q9H920 327 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 CCNB1IP1Q9NPC3 277 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 FKBP14Q9NWM8 211 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 LRCH1Q9Y2L9 728 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 RTTNQ86VV8 2226 aa22.12■■□□□ 1.13
SSBP3-202ENST00000357475 PTGES3LE9PB15 166 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 MAGEB4O15481 346 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-202ENST00000357475 HOXC12P31275 282 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 HIST1H3AP68431 136 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 RAB40BQ12829 278 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 POU4F2Q12837 409 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 GSG1Q2KHT4 349 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 SLC36A2Q495M3 483 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 PABPC1L2AQ5JQF8 200 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 HIST2H3PS2Q5TEC6 136 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF774Q6NX45 483 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 HIST2H3AQ71DI3 136 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF540Q8NDQ6 660 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 MS4A3Q96HJ5 214 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ABHD6Q9BV23 337 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 YIPF3Q9GZM5 350 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 PNRC2Q9NPJ4 139 aaKnown RBP22.11■■□□□ 1.13
SSBP3-202ENST00000357475 NPAP1Q9NZP6 1156 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 LRRK2Q5S007 2527 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 A0A1W2PQL4 384 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-202ENST00000357475 PSMD9O00233 223 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 UBL3O95164 117 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ALOX5APP20292 161 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF85Q03923 595 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 PPA1Q15181 289 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF584Q8IVC4 421 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 CPEB3Q8NE35 698 aaKnown RBP22.11■■□□□ 1.13
SSBP3-202ENST00000357475 OR2AJ1Q8NGZ0 328 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 THEM6Q8WUY1 208 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 LRRC46Q96FV0 321 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 KCNN2Q9H2S1 579 aa22.11■■□□□ 1.13
SSBP3-202ENST00000357475 FGF20Q9NP95 211 aaPredicted RBP22.11■■□□□ 1.13
SSBP3-202ENST00000357475 CCDC159P0C7I6 412 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 HOXB1P14653 301 aaPredicted RBP22.1■■□□□ 1.13
SSBP3-202ENST00000357475 SORDQ00796 357 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 ST3GAL4Q11206 333 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 RAB39AQ14964 217 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 OR10A4Q9H209 315 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 ERVK-18Q9QC07 812 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 LAMP5Q9UJQ1 280 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 AMDHD2Q9Y303 409 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 TIMM10BQ9Y5J6 103 aa22.1■■□□□ 1.13
SSBP3-202ENST00000357475 GCN1Q92616 2671 aaKnown RBP22.09■■□□□ 1.13
SSBP3-202ENST00000357475 IGHA1P01876 353 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 C21orf33P30042 268 aaPredicted RBP22.09■■□□□ 1.13
SSBP3-202ENST00000357475 SLC35A2P78381 396 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 KLHL22Q53GT1 634 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 RBM48Q5RL73 367 aaKnown RBP22.09■■□□□ 1.13
SSBP3-202ENST00000357475 VASH1Q7L8A9 365 aaPredicted RBP22.09■■□□□ 1.13
SSBP3-202ENST00000357475 SYT9Q86SS6 491 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 P2RY8Q86VZ1 359 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 WFDC8Q8IUA0 241 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 NANOS1Q8WY41 292 aaKnown RBP22.09■■□□□ 1.13
SSBP3-202ENST00000357475 HSD17B8Q92506 261 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 SLC7A6Q92536 515 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF649Q9BS31 505 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 COPS4Q9BT78 406 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 MED18Q9BUE0 208 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 SCN3BQ9NY72 215 aa22.09■■□□□ 1.13
SSBP3-202ENST00000357475 EFCAB10A6NFE3 127 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 CLDN1O95832 211 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 OR2T7P0C7T2 308 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 PIPP12273 146 aaPredicted RBP22.08■■□□□ 1.13
SSBP3-202ENST00000357475 ZNF83P51522 516 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 IDH3GP51553 393 aaPredicted RBP22.08■■□□□ 1.13
SSBP3-202ENST00000357475 PCBD1P61457 104 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 SCRN3Q0VDG4 424 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 LHFPL3Q86UP9 236 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 CCDC36Q8IYA8 594 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 GJC3Q8NFK1 279 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 OR2T27Q8NH04 317 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 SLAMF6Q96DU3 332 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 C1orf198Q9H425 327 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 DUSP21Q9H596 190 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 PLEK2Q9NYT0 353 aa22.08■■□□□ 1.13
SSBP3-202ENST00000357475 CNOT2Q9NZN8 540 aaKnown RBP22.08■■□□□ 1.13
SSBP3-202ENST00000357475 SGCEO43556 437 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 SYNGR3O43761 229 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 DOK2O60496 412 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 TMCC2O75069 709 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 FADS2O95864 444 aaKnown RBP22.07■■□□□ 1.12
SSBP3-202ENST00000357475 LYNP07948 512 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 HTR1AP08908 422 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 APEX1P27695 318 aaKnown RBP22.07■■□□□ 1.12
SSBP3-202ENST00000357475 ARR3P36575 388 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 CSNK2BP67870 215 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 TMEM53Q6P2H8 277 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 MUCL1Q96DR8 90 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 OBP2BQ9NPH6 170 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 CLEC2DQ9UHP7 191 aa22.07■■□□□ 1.12
SSBP3-202ENST00000357475 A1L4Q6 167 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms