RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 CDK5Q00535 292 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 GLO1Q04760 184 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 DAG1Q14118 895 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 CRMP1Q14194 572 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 GINS1Q14691 196 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 RAB39AQ14964 217 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 RAB35Q15286 201 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 TBC1D28Q2M2D7 210 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 MYPOPQ86VE0 399 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 FBXL14Q8N1E6 418 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 LRRC75A-AS1Q8N1F1 130 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 PQLC1Q8N2U9 271 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 ICA1LQ8NDH6 482 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 SLC30A7Q8NEW0 376 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 SLC26A10Q8NG04 563 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 OR10H5Q8NGA6 315 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 LILRB1Q8NHL6 650 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 FGFBP3Q8TAT2 258 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 IPCEF1Q8WWN9 437 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 C11orf40Q8WZ69 217 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 NEUROG1Q92886 237 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 PIGTQ969N2 578 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 DDOQ99489 341 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 C9orf16Q9BUW7 83 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 TRAF4Q9BUZ4 470 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF416Q9BWM5 594 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 C1QTNF6Q9BXI9 259 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 OR2H1Q9GZK4 316 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 NUAK2Q9H093 628 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 WNT5BQ9H1J7 359 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 FN3KQ9H479 309 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 CDH20Q9HBT6 801 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 EMC7Q9NPA0 242 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 RPRD1BQ9NQG5 326 aaKnown RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 FBXO9Q9UK97 447 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 POU2F3Q9UKI9 436 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 NDRG4Q9ULP0 352 aaKnown RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 OAZ3Q9UMX2 235 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 B9D1Q9UPM9 204 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 PLEKHA6Q9Y2H5 1048 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 COA3Q9Y2R0 106 aaPredicted RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 SPEF1Q9Y4P9 236 aa3.44□□□□□ -1.86
CNOT4-202ENST00000356162 ASH1LQ9NR48 2969 aaKnown RBP3.44□□□□□ -1.86
CNOT4-202ENST00000356162 OR6C68A6NDL8 312 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ZAR1LA6NP61 321 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 E7EQL1 145 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SURF4O15260 269 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 DOK2O60496 412 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SCG5P05408 212 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 DANCRP0C864 163 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF35P13682 527 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SPI1P17947 270 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PRKACGP22612 351 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 POU1F1P28069 291 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PCSK6P29122 969 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 FABP6P51161 128 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HIST1H3AP68431 136 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 NKX6-1P78426 367 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 GALK2Q01415 458 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 TEKQ02763 1124 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SNTB2Q13425 540 aaKnown RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 KEAP1Q14145 624 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ETFDHQ16134 617 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 DEFB113Q30KQ7 82 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PABPC1L2AQ5JQF8 200 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SLC35D3Q5M8T2 416 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SLC35F1Q5T1Q4 408 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HIST2H3PS2Q5TEC6 136 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 LCN1P1Q5VSP4 162 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 AGAP6Q5VW22 663 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SLX4IPQ5VYV7 408 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 C12orf73Q69YU5 71 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 C11orf71Q6IPW1 123 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ZNF584Q8IVC4 421 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 OR6V1Q8N148 313 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 LRRC18Q8N456 261 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PROKR2Q8NFJ6 384 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 TMEM171Q8WVE6 324 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HTRA1Q92743 480 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 FBXO17Q96EF6 278 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PLEKHA8Q96JA3 519 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 DCLRE1CQ96SD1 692 aaKnown RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 COQ7Q99807 217 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 FOXC2Q99958 501 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 HDHD2Q9H0R4 259 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 SEMA6AQ9H2E6 1030 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CXorf56Q9H5V9 222 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 C8orf4Q9NR00 106 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CBLN4Q9NTU7 201 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 CISD1Q9NZ45 108 aaKnown RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 TMEFF2Q9UIK5 374 aaPredicted RBP3.43□□□□□ -1.86
CNOT4-202ENST00000356162 MOKQ9UQ07 419 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 TIMM10BQ9Y5J6 103 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 ORC6Q9Y5N6 252 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 U3KQE9 123 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 OR6C6A6NF89 314 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 VSTM5A8MXK1 200 aa3.43□□□□□ -1.86
CNOT4-202ENST00000356162 PRR23D1E9PI22 279 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms