RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FN3KQ9H479 309 aa14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 LPAR2Q9HBW0 351 aa14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 VNN3Q9NY84 501 aa14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 MAGEL2Q9UJ55 1249 aa14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 KLHL21Q9UJP4 597 aa14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
PDLIM7-201ENST00000355572 COL6A5A8TX70 2615 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 IGLV1-36A0A0B4J1U3 117 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 TCRBV5S2A0A599 114 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 RER1O15258 196 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 PPIHO43447 177 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 SPRY3O43610 288 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 DOK2O60496 412 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 GADD45GO95257 159 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 GAAP10253 952 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 PSKH1P11801 424 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 NR2C1P13056 603 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 RRM2P31350 389 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 MVKQ03426 396 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 KRTAP24-1Q3LI83 254 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 SAMD4BQ5PRF9 694 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 MBNL2Q5VZF2 373 aaKnown RBP14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 CYP2R1Q6VVX0 501 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 Q6ZR03 302 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 RINLQ6ZS11 566 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 LINC01356Q8N9X3 169 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 FNDC8Q8TC99 324 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 NSMCE2Q96MF7 247 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 LRRC37BQ96QE4 947 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 MSL2Q9HCI7 577 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 ASH2LQ9UBL3 628 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 AURKCQ9UQB9 309 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 STARD10Q9Y365 291 aa14.21□□□□□ -0.13
PDLIM7-201ENST00000355572 C12orf71A8MTZ7 269 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 XKRYO14609 159 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 SGCEO43556 437 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 T-ENOLP0DO92 83 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 HIST1H1CP16403 213 aaKnown RBP14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 CRYBB2P43320 205 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 HTR5AP47898 357 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 GSSP48637 474 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF81P51508 661 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 MS4A2Q01362 244 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 PSG7Q13046 419 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 RSPO1Q2MKA7 263 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF718Q3SXZ3 478 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 GPR139Q6DWJ6 353 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 PGBD2Q6P3X8 592 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 TMEM154Q6P9G4 183 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 SMARCD3Q6STE5 483 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 DPY19L2P2Q6ZN68 376 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 SYT9Q86SS6 491 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 OR9Q2Q8NGE9 314 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 FANK1Q8TC84 345 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNRF4Q8WWF5 429 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 HPS1Q92902 700 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 SAMD8Q96LT4 415 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 ERMAPQ96PL5 475 aaPredicted RBP14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 NMNAT3Q96T66 252 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 BTBD10Q9BSF8 475 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 SLCO1C1Q9NYB5 712 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 NKIRAS2Q9NYR9 191 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 LHFPL6Q9Y693 200 aa14.2□□□□□ -0.14
PDLIM7-201ENST00000355572 IGHV1-69-2A0A0G2JMI3 117 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 OR6C6A6NF89 314 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 RNF212BA8MTL3 300 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 DEAF1O75398 565 aaPredicted RBP14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 KHDRBS3O75525 346 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 TFP02787 698 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 FABP3P05413 133 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 SRD5A1P18405 259 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 PRSS12P56730 875 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 HIST1H3AP68431 136 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 MRPS11P82912 194 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 RFX4Q33E94 735 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 HIST2H3PS2Q5TEC6 136 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 CORO6Q6QEF8 472 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 HIST2H3AQ71DI3 136 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 ZDHHC21Q8IVQ6 265 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 OR6V1Q8N148 313 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 OR8D4Q8NGM9 314 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 OR4K13Q8NH42 304 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 SNX33Q8WV41 574 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 CCT8L2Q96SF2 557 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 PLA2G12AQ9BZM1 189 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 EGLN3Q9H6Z9 239 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 IL1RAPQ9NPH3 570 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 EIF3KQ9UBQ5 218 aaKnown RBP14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 LPAR3Q9UBY5 353 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 WIPI2Q9Y4P8 454 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 MXRA5Q9NR99 2828 aa14.19□□□□□ -0.14
PDLIM7-201ENST00000355572 OR6C68A6NDL8 312 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 AHCYL1O43865 530 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 OR10H3O60404 316 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 UBOX5O94941 541 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 AVPP01185 164 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 COX5BP10606 129 aa14.18□□□□□ -0.14
PDLIM7-201ENST00000355572 FPR3P25089 353 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms